DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6843 and Cir1

DIOPT Version :9

Sequence 1:NP_649072.1 Gene:CG6843 / 40062 FlyBaseID:FBgn0036827 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_001007800.1 Gene:Cir1 / 362149 RGDID:1309199 Length:451 Species:Rattus norvegicus


Alignment Length:434 Identity:171/434 - (39%)
Similarity:229/434 - (52%) Gaps:83/434 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKGFNNYMCKKFFHPASRDNLKRVWMAEQQAEAYKKKQEELRNQYEKEQNLHENKAMLSKDSKD 65
            |||.|.|:||||.|||||:.|:|:||||||:....|||||||..||.|||..::|: :|..|.:.
  Rat     1 MGKSFANFMCKKDFHPASKSNIKKVWMAEQKISYDKKKQEELMQQYLKEQESYDNR-LLMGDERV 64

  Fly    66 KLSVNFMYEPPPGVR---KEREKDDNEPEYKFEWQRKYNAPRESYCKGDTEIRDQPFGIQVRNVR 127
            |..:|||||.||||:   ||:|:.:.|.|||||||:  .||||.|.|.|..||||||||||||||
  Rat    65 KNGLNFMYEAPPGVKKENKEKEETEGETEYKFEWQK--GAPREKYAKDDMNIRDQPFGIQVRNVR 127

  Fly   128 CLKCHKWGHINTDKECTMYSISMSEARKLHAETEASDIMAKNVLEEQMKEDGLMMKRSAQELQSI 192
            |:|||||||:|||:||.::.:|...|..:..:.....:....::.| |:..|..:||:... :::
  Rat   128 CIKCHKWGHVNTDRECPLFGLSGINASSVPTDGSGPSMHPSELIAE-MRNSGFALKRNVLG-RNL 190

  Fly   193 RAIQQQHQLVPSDGEKDAHADDQNPELVFLKSLSKKQKLKLLKKLEKIERMKRKGEGIKKPTKRK 257
            .|.......|.||||:|       ||:.|||||:.|||.|||:||:::|:.|:|.:..||..|.:
  Rat   191 TANDPSQDYVASDGEED-------PEVEFLKSLTTKQKQKLLRKLDRLEKKKKKKKSDKKKKKLQ 248

  Fly   258 SKKERHEKDSKKKKSKKDKSSRKDKKGSVSNSSDSSSSSDS---SDSEDNHKSNHRDDKRNGHQR 319
            ..|.:|:|..|...|....||......|.|:||.|||:|.|   |.||.::|.....:||...::
  Rat   249 KSKNKHKKHKKSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSETDSSSESDNKEKKEKEKRKKRKK 313

  Fly   320 T------------------------------------------------------------RDSD 324
            |                                                            |...
  Rat   314 TKCSGNKSGDCKEYKSKNMLYEELSSSHSDRGKAQEKLRLLKQESSGENSTWVHSGSDRKSRSHQ 378

  Fly   325 HSYQRR-SNENRHRRDRSRS----RDRSRSLSRDRRRERERRDR 363
            ||.:|: |:.|...|.|||:    |.||||....:.||||.|.|
  Rat   379 HSPERKGSDRNGGSRSRSRAEGSRRSRSRSPCGQKHREREARSR 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6843NP_649072.1 Cir_N 13..49 CDD:287204 22/35 (63%)
Cir1NP_001007800.1 Interaction with RBPJ. /evidence=ECO:0000250 1..121 71/122 (58%)
Cir_N 13..49 CDD:287204 22/35 (63%)
Interaction with RP9. /evidence=ECO:0000250 204..232 18/34 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..451 62/210 (30%)
Nuclear localization signal. /evidence=ECO:0000255 233..247 4/13 (31%)
Nuclear localization signal. /evidence=ECO:0000255 307..315 2/7 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338063
Domainoid 1 1.000 217 1.000 Domainoid score I2602
eggNOG 1 0.900 - - E1_KOG3794
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 285 1.000 Inparanoid score I2775
OMA 1 1.010 - - QHG58189
OrthoDB 1 1.010 - - D1604301at2759
OrthoFinder 1 1.000 - - FOG0006267
OrthoInspector 1 1.000 - - oto97044
orthoMCL 1 0.900 - - OOG6_106007
Panther 1 1.100 - - LDO PTHR13151
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5216
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.810

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