DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6843 and cir-1

DIOPT Version :10

Sequence 1:NP_649072.1 Gene:CG6843 / 40062 FlyBaseID:FBgn0036827 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_491654.1 Gene:cir-1 / 172225 WormBaseID:WBGene00018892 Length:560 Species:Caenorhabditis elegans


Alignment Length:410 Identity:160/410 - (39%)
Similarity:219/410 - (53%) Gaps:71/410 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKGFNNYMCKKFFHPASRDNLKRVWMAEQQAEAYKKKQEELRNQYEKEQNLHENKAMLSKDSKD 65
            |||||.|:|.||.|||::..|||.||.|.|:.....|:|||||..|||||.:..|||:|. |.|.
 Worm     1 MGKGFQNFMSKKDFHPSAFRNLKMVWEARQKKSLEDKRQEELRVAYEKEQEILNNKALLG-DEKA 64

  Fly    66 KLSVNFMYEPPPGVRKEREKDDNEPEYKFEWQRKYNAPRESYCKGDTEIRDQPFGIQVRNVRCLK 130
            |:.::|||:.|.|:.| ||:...||  ||||||||.||||.:.||:.||:|||||||||||||.|
 Worm    65 KMGLSFMYDAPAGMTK-REEPKEEP--KFEWQRKYQAPREDWAKGNEEIQDQPFGIQVRNVRCCK 126

  Fly   131 CHKWGHINTDKECTMYSIS---------------MSEARKLHAETEASDIMAKN----------- 169
            ||||||||||:||.::..|               :.:.|:...|.:|....:|:           
 Worm   127 CHKWGHINTDRECPLFGKSGNFEDEGYANNPSDLIKDLRRRRQEGKAGPSTSKSSAAAATGEDDD 191

  Fly   170 ---------VLEEQMKEDGLMMKRSAQELQSIRAIQQQHQLVPSDGEKDAHADDQNPELVFLKSL 225
                     :..:..:|.|:.:|.|.     :..:|...||.....|    ..::...|.|..|:
 Worm   192 EDEWMDHQQLASDMREEHGIKLKSSV-----LAGMQTDQQLTRMKKE----MTEEEMMLEFFNSM 247

  Fly   226 SKKQKLKLLKKLEKIERMKRKGEGIKKPTKRKSKKERHEKDSKKKKSKKDKSSRKDKKGSVSNSS 290
            ::|:|.||.|||       ..|..::...|:|||||: :|:.|:|:..|||...| ||...|.|.
 Worm   248 TEKEKKKLHKKL-------MSGADLEDVMKKKSKKEK-KKEKKEKRKNKDKKKDK-KKNKKSKSR 303

  Fly   291 DSSSSSDSSDSEDNHKSNHRDDKRNGHQRTRDSDHSYQRR--------SNENRH-RRDRSRSRDR 346
            ::...||.|||||:.|  .:..||  .:|..:|...|:.:        .:||.| |:|.||.|..
 Worm   304 ETDDDSDGSDSEDDWK--EKSSKR--IKREVESSPEYRSKYIKQEVLSEDENSHGRKDSSRKRAH 364

  Fly   347 SRSLSRDRRRERERRDRSRR 366
            :.|.|.:..|..||: ||||
 Worm   365 NDSESSNEVRSSERK-RSRR 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6843NP_649072.1 Cir_N 14..49 CDD:462992 18/34 (53%)
cir-1NP_491654.1 Cir_N 13..49 CDD:198151 18/35 (51%)

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