DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL26 and mrpl-24

DIOPT Version :10

Sequence 1:NP_649070.1 Gene:RpL26 / 40060 FlyBaseID:FBgn0036825 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_491613.1 Gene:mrpl-24 / 172204 WormBaseID:WBGene00019076 Length:278 Species:Caenorhabditis elegans


Alignment Length:156 Identity:43/156 - (27%)
Similarity:58/156 - (37%) Gaps:52/156 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FVSSSRRKNRKRHFQAPSHIRR--RLMSAPLSKELRQKYNVRSMPIRR----------DDEVQVI 58
            :|.|.||....:  |..||:.|  :..||.||   .|.:|:|.....|          .|.|||:
 Worm    59 YVPSHRRPWEDK--QISSHLHRSDKYFSAQLS---NQYFNLRRPKSERMADTEWTFFPGDLVQVM 118

  Fly    59 RGHFKGNQVGKVVQAYRKKFVVYVEKIQRENANGTNVYVGIHPSKVLIVKLKLDKDRKAILERRG 123
            .|..||.| |.|:...|....|.|:              |:|        .||.:|    :|...
 Worm   119 VGKDKGRQ-GLVLTTSRDSSDVIVD--------------GLH--------TKLGED----MEGSE 156

  Fly   124 KGRLAALGKDKGKYTEETAAQPMETA 149
            |     ||.||....:|   ||:..:
 Worm   157 K-----LGVDKTLRWQE---QPLSVS 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL26NP_649070.1 Ribosomal_L26 8..122 CDD:465307 34/125 (27%)
mrpl-24NP_491613.1 KOW_RPL26 112..180 CDD:240513 27/98 (28%)
ribosomal_L24 <167..210 CDD:465359 3/11 (27%)

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