DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3902 and aidB

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_418608.6 Gene:aidB / 948710 ECOCYCID:EG11811 Length:541 Species:Escherichia coli


Alignment Length:385 Identity:79/385 - (20%)
Similarity:159/385 - (41%) Gaps:55/385 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 KKMDFEHKFDPS---VVKAVFENGLMGI--EIDTELG---GSGCNFMTNIVVVEELSKIDPAVAA 117
            :::| :.:|.|:   :::|:..|.:..:  |.|...|   .....||.:..|  |...:.|....
E. coli    77 RRLD-DVRFHPAWHLLMQALCTNRVHNLAWEEDARSGAFVARAARFMLHAQV--EAGSLCPITMT 138

  Fly   118 FVDIHNTLVNSLMIKFGNAEQKAKYLPKLAQEYAG-------------SFALTEPGAGSDAFSLK 169
            |.      ...|:::...|..:....|.|:..|..             ...:||...|||..|..
E. coli   139 FA------ATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNT 197

  Fly   170 TVAKK--DGSHYVINGSKMWISNSDVAGVFLIFANAKPEDGYRGITTFIVDRETP-----GLIVN 227
            |.|::  |||:.:: |.| |..:...:...|:.|...     .|::.|.|.|..|     .:.:.
E. coli   198 TRAERLEDGSYRLV-GHK-WFFSVPQSDAHLVLAQTA-----GGLSCFFVPRFLPDGQRNAIRLE 255

  Fly   228 KPEDKLGIRASGTCQLTFDNVRVPEENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDAT 292
            :.:||||.|::.:|::.|.:.   ...:||..|.|.:.........|...|.....:.:..|...
E. coli   256 RLKDKLGNRSNASCEVEFQDA---IGWLLGLEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSLA 317

  Fly   293 IPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMAKYYASE- 356
            |.:..:|..||:.:.....|:|.::.:|.::|....:.:..||..::... .|||..|:.:... 
E. coli   318 IYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDRRAD-AKEALWARLFTPAA 381

  Fly   357 ---VAQRA---AIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 410
               :.:|.   ..:.::.:||:|:..:....:.||::.:.:|:||:.|:....:.:.:.|
E. coli   382 KFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNK 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 79/385 (21%)
SCAD_SBCAD 39..410 CDD:173847 78/383 (20%)
aidBNP_418608.6 PRK11561 1..538 CDD:183199 79/385 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
21.900

Return to query results.
Submit another query.