DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3902 and ydiO

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_416210.4 Gene:ydiO / 945626 ECOCYCID:G6918 Length:383 Species:Escherichia coli


Alignment Length:385 Identity:111/385 - (28%)
Similarity:193/385 - (50%) Gaps:18/385 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LTDDEKMMKETVAKLAQEQI-QPLVKKMDFEHKFDPSVVKAVFENGLMGIEIDTELGGSGCNFMT 100
            ||::::::..::.:|..... :...:..|....:....::|:.:||:..:.:..|.||...:::|
E. coli     5 LTEEQELLLASIRELITTNFPEEYFRTCDQNGTYPREFMRALADNGISMLGVPEEFGGIPADYVT 69

  Fly   101 NIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYLPKLAQ------EYAGSFALTEP 159
            .::.:.|:||.  ...||:..:...::| |.:||:|||    |.|.|:      :.|.:.|||||
E. coli    70 QMLALMEVSKC--GAPAFLITNGQCIHS-MRRFGSAEQ----LRKTAESTLETGDPAYALALTEP 127

  Fly   160 GAGSDAFSLKTV-AKKDGSHYVINGSKMWISNSDVAGVFLIFA-NAKPEDGYRGITTFIVDRETP 222
            |||||..|..|. .:|:|..| |||.|.:|:.:......|:.| :.:|:|..:..|.:.||...|
E. coli   128 GAGSDNNSATTTYTRKNGKVY-INGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKP 191

  Fly   223 GLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQG 287
            |:.:| |..|:|.....||::..|||.|.|.:::|..|.|:..........|:..||:..|.|:.
E. coli   192 GIKIN-PLHKIGWHMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAEC 255

  Fly   288 TFDATIPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMAKY 352
            .|:....|..:|..||..|.:.|.:|.::|.:|.:|:..|.|....|...:|....:..||:||.
E. coli   256 AFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALAKL 320

  Fly   353 YASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKKDY 412
            |.:..|.......:..|||:|:|.:....:::|||:...|..||..:.:....:.|.|||
E. coli   321 YCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILKDY 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 111/385 (29%)
SCAD_SBCAD 39..410 CDD:173847 106/379 (28%)
ydiONP_416210.4 PRK12341 1..381 CDD:183454 111/385 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 97 1.000 Domainoid score I372
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Inparanoid 1 1.050 183 1.000 Inparanoid score I179
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000508
OrthoInspector 1 1.000 - - mtm9754
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
76.860

Return to query results.
Submit another query.