DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and IVD

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_190116.1 Gene:IVD / 823668 AraportID:AT3G45300 Length:409 Species:Arabidopsis thaliana


Alignment Length:404 Identity:132/404 - (32%)
Similarity:224/404 - (55%) Gaps:9/404 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 MLANAARQQSAAMSSATGLPPPLTFLTDDEKM-MKETVAKLAQEQIQPLVKKMDFEHKF--DPSV 73
            :|..|.:.:..:.||.:.     :.|.||.:: .||:|:|.||:.|.|..:::|..:.|  |.::
plant    10 ILGYAVKTRRRSFSSRSS-----SLLFDDTQLQFKESVSKFAQDNIAPHAERIDKTNSFPKDVNL 69

  Fly    74 VKAVFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQ 138
            .|.:.|..|.||....|.||.|..::.:.:.:||:|:...:||.....|:.|..:.:::.|.|.|
plant    70 WKLMGEFNLHGITAPEEYGGLGLGYLYHCIAMEEISRASGSVALSYGAHSNLCINQLVRNGTAAQ 134

  Fly   139 KAKYLPKL-AQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSDVAGVFLIFAN 202
            |.|||||| :.|:.|:.|::||.||||...:|..|:|....|::||:|||.:|...|...:::|.
plant   135 KEKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKAEKVDGGYILNGNKMWCTNGPSAETLVVYAK 199

  Fly   203 AKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGHGYKYAA 267
            ...:.|.:|||.||:::...|....:..||||:|.|.||:|.|:|..|||||||...|.|.....
plant   200 TDTKAGSKGITAFIIEKGMTGFSTAQKLDKLGMRGSDTCELVFENCFVPEENILDKEGKGVYVLM 264

  Fly   268 GFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYN 332
            ..|:..|:.:||..:|:.|...|..:||:.:|:|||..:..||.:|.::|.:.|.::::|...|:
plant   265 SGLDLERLVLAAGPLGIMQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSYVYS 329

  Fly   333 AARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTT 397
            .||..:.|....|:.|.....|:|.|.:.|::.:..:||.|:..::...:..||.|:..|..||:
plant   330 VARDCDNGKVDPKDCAGTILCAAERATQVALQAIQCLGGNGYINEYATGRLLRDAKLYEIGAGTS 394

  Fly   398 NMQLSTIAKCIKKD 411
            .::...|.:.:.|:
plant   395 EIRRIVIGRELFKE 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 128/379 (34%)
SCAD_SBCAD 39..410 CDD:173847 126/374 (34%)
IVDNP_190116.1 PLN02519 32..409 CDD:215284 127/377 (34%)
IVD 32..407 CDD:173845 126/374 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 1 1.000 - - FOG0000508
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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