DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and unk

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:XP_012827260.1 Gene:unk / 613106 XenbaseID:XB-GENE-969153 Length:844 Species:Xenopus tropicalis


Alignment Length:227 Identity:50/227 - (22%)
Similarity:76/227 - (33%) Gaps:72/227 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 NGLMGIEIDTELGGS-----GCNFMTNIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQK 139
            :.|..:...|:|.||     ||             :.:.:|.|  |...:..:...:|..:.|.:
 Frog   433 HSLDNLGFHTDLPGSYKKAPGC-------------EREDSVGA--DYLKSFKSQAKLKTHSLEHR 482

  Fly   140 AKYLPKL--AQEYAGSFALTEPGAGSDAFSL-KTVAKKDGSHYVINGSKMWISNSDVAGVFLIFA 201
            ....|.|  .||..|...:..|...|.:.|: .::|....|...|:|:..            :.|
 Frog   483 NPEQPLLQSKQEVLGMLPMGSPLTSSISSSITSSLAATPPSPAAISGTPG------------MNA 535

  Fly   202 NAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQL--TFDNVRVPEENILGTFGHGYK 264
            ||.|         |....:|...::....|.|.:...|...|  |||:..||             
 Frog   536 NALP---------FYPTSDTVESVIESALDDLDLNEFGVAALEKTFDSSSVP------------- 578

  Fly   265 YAAGFLNEGRIGIAAQMVG--LAQGTFDATIP 294
             |||       ||   |:|  |.|.:....||
 Frog   579 -AAG-------GI---MIGGSLMQSSAPVNIP 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 50/227 (22%)
SCAD_SBCAD 39..410 CDD:173847 50/227 (22%)
unkXP_012827260.1 zf_CCCH_5 61..94 CDD:375810
zf-CCCH 319..344 CDD:366217
COG4372 689..>822 CDD:226809
RING_Ubox 804..834 CDD:388418
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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