DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acadvl

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_997776.1 Gene:acadvl / 573723 ZFINID:ZDB-GENE-030131-899 Length:659 Species:Danio rerio


Alignment Length:413 Identity:142/413 - (34%)
Similarity:219/413 - (53%) Gaps:29/413 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 MSSATGLPPPLTFLTDDEKMMKETV---AKLAQEQIQPLVKKMDFEHKFDPSVVKAVFENGLMGI 85
            :|::...|.|.....:..:.::|.|   :|..:|...|:  |.|...|.:...::.:.|.|..|:
Zfish    87 ISTSQVFPYPSVLNEEQSQFLRELVGPCSKFFEEVNDPM--KNDALEKVEEHTLQGLKEMGAFGL 149

  Fly    86 EIDTELGGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYLPKLAQ-E 149
            ::..:|||.|........:||.:...|..|...:..|.::....::.|||.:||.|||||||. |
Zfish   150 QVPADLGGVGLTNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGNPQQKEKYLPKLATGE 214

  Fly   150 YAGSFALTEPGAGSDAFSLKTVAKKD--GSHYVINGSKMWISNSDVAGVFLIFANAKPEDGYRG- 211
            ...:|.||||.:||||.|:||.|.:.  |.:|.:||||:||||...|.:|.:||....:|...| 
Zfish   215 NIAAFCLTEPASGSDAASIKTTAVRSPCGQYYTMNGSKIWISNGGTAEIFTVFAKTPVKDEKTGE 279

  Fly   212 ----ITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGHGYKYAAGFLNE 272
                ||.|||:|...|:....||.|:||:||.|.::.|:|||||.:.:||..|.|:|.|...||.
Zfish   280 MKDKITAFIVERSFGGVSSGPPEKKMGIKASNTAEVYFENVRVPADCVLGEVGGGFKVAMNILNN 344

  Fly   273 GRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQ 337
            ||.|:||.:.|..:|.....:.:...|.|||:.|:|:.::|.::|.:|........|.|..:...
Zfish   345 GRFGMAAALSGTMKGVITKAVDHAANRTQFGNKIHNYGAIQEKMARMAMLQYVTESMAYMVSGNM 409

  Fly   338 EQG-VPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNM-- 399
            :.| ..||.|||::|.:|||.|.....:|:..|||:||.:|...|:..||::|..|:|||.::  
Zfish   410 DSGATEFQIEAAISKIFASEAAWLVTDECIQVMGGMGFMKDAGVERVLRDLRIFRIFEGTNDILR 474

  Fly   400 -------------QLSTIAKCIK 409
                         ||.::.|.:|
Zfish   475 LFVALNGFQNAGNQLKSLQKALK 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 139/400 (35%)
SCAD_SBCAD 39..410 CDD:173847 139/398 (35%)
acadvlNP_997776.1 VLCAD 77..486 CDD:173850 138/400 (35%)
CaiA 107..478 CDD:224871 135/372 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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