DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acox1

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001015762.1 Gene:acox1 / 548479 XenbaseID:XB-GENE-1008078 Length:661 Species:Xenopus tropicalis


Alignment Length:479 Identity:104/479 - (21%)
Similarity:180/479 - (37%) Gaps:114/479 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 MLANAARQQSAAMSSATGLPPPLTFLTD--DEKMMKETVAKLAQEQIQPLV-KKMDFEHKFDPSV 73
            |..:.:|:::||..:    |..:|.:.|  .|:..:       :.:|:.|| ....|:|: ||:.
 Frog     1 MNPDLSRERAAASFN----PETITVILDGSPERTRR-------RREIEGLVLNDPSFQHE-DPNF 53

  Fly    74 VK-------AVFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKIDPA----VAAFV-------- 119
            :.       |:.::.||                  :..:.|....||.    ..:||        
 Frog    54 LSRSERYELAIKKSALM------------------VQKMREHGISDPEEIYWFKSFVHRGRPEPL 100

  Fly   120 DIHNTLVNSLMIKFGNAEQKAK-YLPKLAQEYAGSFALTEPGAGSDAFSLKTVAKKDGS--HYVI 181
            |:|..:....::.....||:.: ::|....|..|::|.||.|.|:....|:|.|..|.|  .:::
 Frog   101 DLHLGMFLPTLLNQATPEQQERLFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPSTQEFIL 165

  Fly   182 NGS-----KMW------ISNSDVAGVFLIFANAKPEDGYRGITTFIV-------DRETPGLIVNK 228
            |..     |.|      .||..|     :.|....:...||:..|||       ....||::|..
 Frog   166 NSPTVSSIKWWPGGLGKTSNHAV-----VLAQLYTQGECRGLHAFIVPIRHMGTHEPLPGVVVGD 225

  Fly   229 PEDKLGIRASGTCQLTFDNVRVPEENIL---------GTFGH--GYKYAAG---FLNEGRIGIAA 279
            ...|.|...:....|.||.:|:|.||:|         ||:..  ..|...|   |:....:|.:|
 Frog   226 IGPKFGFDETDNGFLKFDKLRIPRENMLMKYAKVEPDGTYVKPLSDKLTYGTMVFIRSMIVGDSA 290

  Fly   280 QMVGLAQGTFDATIPYLLERKQ----FGD---AIYNFQSMQHQIATVATEIEAARLM------TY 331
            :.:..|   ....|.|...|.|    .|:   .|.:||:.|:::..:.....|.:.:      ||
 Frog   291 RSLSRA---CTIAIRYSAVRHQSEIRAGEPEPQILDFQTQQYKLFPLLATAYAFQFVGSYMSHTY 352

  Fly   332 N--AARLQEQGVPFQKE----AAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIG 390
            :  :|.:|...:....|    :|..|.:.:..|.....:|....||.|::|.......|......
 Frog   353 HRISAEIQAGNLNELPELHALSAGLKAFTTWAANTGIEECRMACGGHGYSRCSGIPDIYVTFTPA 417

  Fly   391 AIYEGTTNMQLSTIAKCIKKDYAA 414
            ..|||...:.:...|:.:.|.|.|
 Frog   418 CTYEGENTVMMLQTARFLVKSYKA 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 97/452 (21%)
SCAD_SBCAD 39..410 CDD:173847 95/446 (21%)
acox1NP_001015762.1 AXO 3..638 CDD:173839 103/477 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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