DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acox1

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001005933.1 Gene:acox1 / 449662 ZFINID:ZDB-GENE-041010-219 Length:660 Species:Danio rerio


Alignment Length:445 Identity:96/445 - (21%)
Similarity:155/445 - (34%) Gaps:122/445 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LTFLTDDEKMMKETVAKLAQEQIQPLVKKMDFEHKFDP-------SVVKAVFENGLMGIEIDTEL 91
            |.||:..|: ....|.|.||     ::.|:......||       :||:.||:..|         
Zfish    51 LNFLSRSER-YDAAVRKSAQ-----MILKLREYGISDPEEIYSYKTVVRGVFQEPL--------- 100

  Fly    92 GGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYLPKLAQEY--AGSF 154
                                        .:||.:....:.....|||:.|::| ||:.:  .|::
Zfish   101 ----------------------------GVHNVMFIPTLKSQCTAEQRKKWIP-LAESFHMLGTY 136

  Fly   155 ALTEPGAGSDAFSLKTVAKKDGS--HYVINGS-----KMW------ISNSDVAGVFLIFANAKPE 206
            |.||.|.|:...:|:|.|..|.|  .:|:|.|     |.|      .||..:     :.|....:
Zfish   137 AQTELGHGTHIRALETTATYDPSTQEFVLNSSTISSIKWWPGGLGKTSNHAI-----VLAQLYTQ 196

  Fly   207 DGYRGITTFI-------VDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENIL-------- 256
            ....|:..||       .....||::|.....|.|........|..:|||:|.||:|        
Zfish   197 GKCHGLHAFITPIRCMKTHMPLPGVVVGDIGPKFGFDEVDNGYLKLENVRIPRENMLMKYAQVEP 261

  Fly   257 -GTFGHGYKYAAGFLNEG-RIGIAAQMVGLAQGTFDAT----IPYLLERKQF----GD---AIYN 308
             ||:   .|..:..|..| .:.|.:.:||.:......:    |.|...|.|.    |:   .|.:
Zfish   262 DGTY---VKPPSDKLTYGTMVFIRSMIVGESARALSKSCTIAIRYSAVRHQSELRPGEPEPQILD 323

  Fly   309 FQSMQHQIATVATEIEAARLM------TYNA----------ARLQEQGVPFQKEAAMAKYYASEV 357
            :|:.|:::..:.....|...:      ||:.          :.|.|    ....:|..|.:.:..
Zfish   324 YQTQQYKLFPLLATAYAFHFVGQYMNKTYHRISGDISLGDFSELPE----LHALSAGLKAFTTWA 384

  Fly   358 AQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKKDY 412
            |......|....||.|::|.......|........|||...:.:...|:.:.|.|
Zfish   385 ANTGIEVCRMSCGGHGYSRCSSLPDIYVTFTPTCTYEGENTVMMLQTARYLVKSY 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 94/442 (21%)
SCAD_SBCAD 39..410 CDD:173847 91/436 (21%)
acox1NP_001005933.1 AXO 3..637 CDD:173839 96/445 (22%)
PLN02443 5..656 CDD:178062 96/445 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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