DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acox3

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_998312.1 Gene:acox3 / 406421 ZFINID:ZDB-GENE-040426-2163 Length:692 Species:Danio rerio


Alignment Length:421 Identity:97/421 - (23%)
Similarity:157/421 - (37%) Gaps:96/421 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 EHKF-----DPSVVKAVFENGLMGIEIDTELGGSGCN--FMTNIVVVEELSK------------- 110
            :|.|     ||...:...|:  :.:|...||....|.  |..:.:..|||.:             
Zfish    41 QHVFRTLESDPLFARQPGED--VPVEQKRELTFLRCKQLFKYDFITREELMQNPWKMTVLNDCLG 103

  Fly   111 -IDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYLPKLAQEYA-GSFALTEPGAGSDAFSLKTVAK 173
             .|.::.|...::..:..:.::..| :::..|::..:.:... |.|:|||...||:..:|:|.||
Zfish   104 MYDWSLCAKYFLNKGMFGATVVNTG-SQRHLKFVKDIERMMTFGCFSLTELSHGSNTRALRTTAK 167

  Fly   174 KDGS--HYVIN-----GSKMWISN-SDVAGVFLIFANAKPEDG-YRGITTFIV---DRET----P 222
            .|.:  .:|||     .:|.|:.| ...|...::||.....|| ..|:.:|||   |.:|    |
Zfish   168 YDPNTQEFVINSPDFEAAKFWVGNLGKTATHSVVFAQLYTPDGKCHGLHSFIVQVRDPKTLLAMP 232

  Fly   223 GLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGH--------------GYKYAA--GFLN 271
            |::|.....|||..........|.|||:|.||:|...|.              ..::.|  |.|:
Zfish   233 GVMVGDMGKKLGQNGLDNGFAVFHNVRIPRENLLNKTGDVAPDGQYVSPFKDPNKRFGASLGALS 297

  Fly   272 EGRIGIAAQMVGLAQGTFDATIPYLLERKQFGD-----------------------AIYNFQSMQ 313
            .||:||....:...:......:.:...|:|||.                       |:|..:...
Zfish   298 GGRVGITRMALVNLKLAVTVAVRFSATRRQFGPKEDEEIPVLEYQLQQWRLIPFLAAVYALEHFT 362

  Fly   314 HQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGF---- 374
            ...:....|.:...||...:.|..|.|......:..:|...|..|||...:|.:..||.|:    
Zfish   363 KSFSMNFVEFQMGLLMKDKSDRQAELGREIHALSCASKPLGSWTAQRGIQECREACGGHGYLAMN 427

  Fly   375 ----TRDFPQEKYYRDVKIGAIYEGTTNMQL 401
                .||        |......|||..|:.|
Zfish   428 RLGDMRD--------DNDPNCTYEGDNNVLL 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 97/421 (23%)
SCAD_SBCAD 39..410 CDD:173847 97/421 (23%)
acox3NP_998312.1 AXO 11..664 CDD:173839 97/421 (23%)
PLN02312 19..662 CDD:215178 97/421 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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