DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acadm

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_998175.2 Gene:acadm / 406283 ZFINID:ZDB-GENE-040426-1945 Length:426 Species:Danio rerio


Alignment Length:401 Identity:138/401 - (34%)
Similarity:207/401 - (51%) Gaps:14/401 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 NAARQQSAAMSSATGLPPPLTF-LTDDEKMMKETVAKLAQEQIQPLVKKMDFEHKFDPSVVKAVF 78
            :|.....||.:|..|.....:| ||:.:|..:|...|.|:|:|.|.....|...::...::|..:
Zfish    23 SAQASAKAATASLKGGNGGFSFELTEQQKEFQEVARKFAREEIVPAAPSYDRSGEYPFPLIKRAW 87

  Fly    79 ENGLMGIEIDTELGGSGCNFMTNIVVVEEL----SKIDPAVAAFVDIHNTLVNSLMIKFGNAEQK 139
            |.|||...|..:.||.|.......::.|||    :.:..|:.|     |:|....:|..||..|:
Zfish    88 ELGLMNGHIPEDCGGMGLGIFDACLITEELAYGCTGVQTAIEA-----NSLGQMPVIIAGNDAQR 147

  Fly   140 AKYLPKLAQE-YAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSDVAGVFLIFANA 203
            .|||.::.:| ...::.:||||||||...:||.|.|.|..|||||.||||:|...|..:.:.|..
Zfish   148 KKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTRAVKKGDDYVINGQKMWITNGGKANWYFLLART 212

  Fly   204 KPE---DGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGHGYKY 265
            ..:   ...:..|.||||.:|||:...:.|..:|.|.|.|..:||::|.:|:||:|...|.|:|.
Zfish   213 DSDPKCPASKAFTGFIVDADTPGVQPGRKELNMGQRCSDTRGITFEDVVIPKENVLIGEGAGFKI 277

  Fly   266 AAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMT 330
            |.|..::.|..:||...||||...:....|.:|||.||..|...|::...:|.:|.::|.||:..
Zfish   278 AMGAFDKTRPPVAAGATGLAQRALEEATKYAMERKTFGKFIAEHQAVSFLLAEMAMKVELARMAY 342

  Fly   331 YNAARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEG 395
            ..||...:.|......|::||.:|.::|.:.|...|...||.||..::|.||..||.||..||||
Zfish   343 QRAAWEVDMGRRNTYYASIAKAFAGDIANQCASDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEG 407

  Fly   396 TTNMQLSTIAK 406
            |..:|...|::
Zfish   408 TAQIQRLIISR 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 132/378 (35%)
SCAD_SBCAD 39..410 CDD:173847 130/376 (35%)
acadmNP_998175.2 CaiA 44..426 CDD:224871 133/380 (35%)
MCAD 46..423 CDD:173846 132/378 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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