DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3902 and acad11

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_956472.1 Gene:acad11 / 393147 ZFINID:ZDB-GENE-040426-814 Length:769 Species:Danio rerio


Alignment Length:455 Identity:118/455 - (25%)
Similarity:189/455 - (41%) Gaps:80/455 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 MLANAARQQSAAMSSAT----------GLPPPLTFLTDDEKMMKET--------VAKLAQEQIQP 58
            :|.||:...:|....:.          .|.|.|.....|:..|:.:        |.:..::.:.|
Zfish   319 LLGNASSVDAAEFGESVEPLAELGLQIALSPTLALPISDQLFMQSSKGQAVLQHVKRFMRKHVLP 383

  Fly    59 L---VKKMDFEHK------FDPSVVKAVFENGLMGIEIDTELGGSGCNFMTNIVV--VEELSKID 112
            .   ||:....||      ..|.|::          |:..:....|   :.|:.:  |.:||::|
Zfish   384 AEQEVKEYYATHKDTAERWCTPPVIE----------ELKAKARAVG---LWNLFLPEVSDLSQLD 435

  Fly   113 PAVAAFVDIH-------------NTLVNSLMIKFGNAEQKAKYL-PKLAQEYAGSFALTEPG-AG 162
            .|..|....|             :|....::..||..|||..:| |.|..:....|.:|||. |.
Zfish   436 YAYIAEETGHCYYAPEVFNCQAPDTGNMEVLHLFGTEEQKRMWLEPLLRGDIRSCFCMTEPDVAS 500

  Fly   163 SDAFSLKTVAKKDGSHYVINGSKMWISNSDVAG-----VFLIFANAKPEDG---YRGITTFI-VD 218
            |||.:::....:|...::|||.|.|.|.   ||     :.::...:|..|.   ..|:.|.| |.
Zfish   501 SDATNMECTMHRDKDDFIINGKKWWSSG---AGNPKCEIAIVMCRSKAMDSNNKRHGVHTMILVP 562

  Fly   219 RETPGLIVNKP------EDKLGIRASGTCQLTFDNVRVPEENILGTFGHGYKYAAGFLNEGRIGI 277
            ..|||:...:|      :|.:   ..|..::.|||||||..||:...|.|::.|...|..||:..
Zfish   563 MSTPGVKKIRPLTVFGQDDAI---HGGHFEIHFDNVRVPASNIILGEGRGFEIAQKRLGPGRLHH 624

  Fly   278 AAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAAR-LQEQG- 340
            ..:.||||:...:.......:|:.||..:|..:.:.|.||.....|...||:|.:||. |..:| 
Zfish   625 CMRAVGLAECALELLCHRSAQRQTFGKRLYQHEVVAHWIAECRITIAQTRLLTLHAAHTLDTKGN 689

  Fly   341 VPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIA 405
            ...:|:.||.|..|..:|.:.....:...||.|.:.|||..:.|...:...|.:|...:.||:||
Zfish   690 KAARKQIAMIKVAAGRMACKVVDCAIQVYGGAGVSDDFPLAEMYAYARTLRIADGPDEVHLSSIA 754

  Fly   406  405
            Zfish   755  754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 111/420 (26%)
SCAD_SBCAD 39..410 CDD:173847 111/418 (27%)
acad11NP_956472.1 PLN02876 8..759 CDD:215473 118/455 (26%)
ACAD10_11_N-like 34..285 CDD:270703
ACAD_FadE2 364..759 CDD:173844 109/410 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.