DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and Acox57D-p

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001286677.1 Gene:Acox57D-p / 37445 FlyBaseID:FBgn0034628 Length:677 Species:Drosophila melanogaster


Alignment Length:512 Identity:90/512 - (17%)
Similarity:166/512 - (32%) Gaps:149/512 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMNSLKKLPVRMLANAARQQSAAMSSATGLPPPLTFLTDDEKMMK--ETVAKLAQEQIQPLVKKM 63
            |.:|...:|..:..:..:::.||..::...   ..:....|:::|  ..|.:..::.:. |.:.:
  Fly     1 MASSTSVIPTTVNPDLQKERDAASFNSEEF---AAWWAGGEEVLKFNRGVREYMEKDVD-LSEML 61

  Fly    64 DFEHKFDPSVVKAVFENGLMGIE----IDTELGGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNT 124
            ..::|....:::......:.|.:    :..|....|..:..|:...:.:..:.|....|..::..
  Fly    62 QLQNKTHEEIIEFSTRGAIEGAKKLRRLQEERNPGGDVYWPNLYDAQVMWGLVPGGNPFGVMYVM 126

  Fly   125 LVNSLMIKFGNAEQKAKYLPKLAQEY---------AGSFALTEPGAGSDAFSLKTVAKKD--GSH 178
            ||.:|         :|:..|:..:|:         .|::|.||.|.|:....|:|.|..|  ...
  Fly   127 LVKAL---------QAQCTPEQYEEFGKRVELFEICGTYAQTELGHGTYLRGLETRADFDRKTDQ 182

  Fly   179 YVIN-----GSKMW------ISN-----------SDVAGVFLIFANAKPEDGYRGITTFIVDRET 221
            :|:|     ..|.|      .||           .|..|..:.|...:.||.:..:         
  Fly   183 FVLNTPNISSYKWWPGGLGHSSNHCLVMAQLYIDGDCKGPHMFFIQVRDEDTHEPL--------- 238

  Fly   222 PGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQ 286
            ||:.:.....|:|........|...|||:|...:|  ..|                 ||:  .|.
  Fly   239 PGVHIGDIGKKMGFIGVNNGFLGLKNVRIPRTRML--MRH-----------------AQV--KAD 282

  Fly   287 GTFDAT----IPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQKEA 347
            |::.::    :.|....:.......|...|....||:||.        |:|.|.|....|.::|.
  Fly   283 GSYVSSPTNVLTYFAMVRTRCVIAKNNAVMLASAATIATR--------YSAVRRQSPINPNEREP 339

  Fly   348 AMAKY----------YASEVAQRAA----------------------------------IKC--- 365
            .:..:          .|:.||.|.|                                  :.|   
  Fly   340 QIMDHVTQQMKLFPEIATSVAYRKAGDYLWNLYDVTIEDIENGKYERLPELHSLSCALKVTCSMD 404

  Fly   366 ----VDWM----GGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKKDYAA 414
                |:.:    ||.||.........|........|||...:.|..|.:.:.|.:.|
  Fly   405 SASGVEKLRLACGGHGFLTSSNMSSIYVSATAACTYEGENTVLLLQIGRFLMKTWRA 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 84/474 (18%)
SCAD_SBCAD 39..410 CDD:173847 83/468 (18%)
Acox57D-pNP_001286677.1 ACAD 14..653 CDD:299127 87/499 (17%)
PLN02443 16..677 CDD:178062 87/497 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460761
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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