DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and ivd

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_958899.1 Gene:ivd / 368775 ZFINID:ZDB-GENE-030616-262 Length:418 Species:Danio rerio


Alignment Length:401 Identity:137/401 - (34%)
Similarity:231/401 - (57%) Gaps:8/401 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VRMLANAARQQSAAMSSATGLPPPLTFLTDDEKMMKETVAKLAQEQIQPLVKKMDFEHKFDPSV- 73
            |::.|..:|:..|   .|..:...:..||:::..:::||.:..||::.|...::|.:::| |.: 
Zfish    15 VKVSAGVSRRGCA---GAVPVDDIVNGLTEEQIQLRQTVQRFFQEKLAPYADEIDKKNEF-PQMR 75

  Fly    74 --VKAVFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNA 136
              .|.:.:.||:|:....|.||:|..::.:::::||:|::..|:......|:.|..:.|::.||.
Zfish    76 EFWKEMGDLGLLGVTAPVEFGGTGLGYLDHVIIMEEISRVSAAIGLSYGAHSNLCVNQMVRHGNQ 140

  Fly   137 EQKAKYLPK-LAQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSDVAGVFLIF 200
            :||.||:|| |..|:.|:.|::|..:|||..|:|..|||.|.|||:||:|.||:|...|.|.:::
Zfish   141 KQKEKYMPKLLTGEHVGALAMSESNSGSDVVSMKLTAKKQGDHYVLNGNKFWITNGSDADVLIVY 205

  Fly   201 ANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGHGYKY 265
            |...||...||||.|||::..||....:..||||:|.|.||:|.|::.::||||:||....|...
Zfish   206 AKTDPEAVARGITAFIVEKGMPGFSSAQKLDKLGMRGSSTCELVFEDCKIPEENVLGPLNKGVYV 270

  Fly   266 AAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMT 330
            ....|:..|:.:|:..||:.|...|..||||..|:.||..|.:||.||.::|.:.|.:.:.|...
Zfish   271 LMSGLDLERLVLASGPVGIMQAVLDHAIPYLHVREAFGQKIGHFQLMQGKMADMYTRLSSCRQYL 335

  Fly   331 YNAARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEG 395
            ||.||..::|....|:.|....|.:|.|.:.|:..:..:||.|:..|:|..::.||.|:..|..|
Zfish   336 YNVARACDKGHFSAKDCAGVILYCAENATQVALDGIQCLGGNGYINDYPMGRFLRDAKLYEIGAG 400

  Fly   396 TTNMQLSTIAK 406
            |:.::...|.:
Zfish   401 TSEIRRIIIGR 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 132/374 (35%)
SCAD_SBCAD 39..410 CDD:173847 130/372 (35%)
ivdNP_958899.1 IVD 38..415 CDD:173845 132/375 (35%)
PLN02519 39..411 CDD:215284 132/372 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 1 1.000 - - FOG0000508
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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