DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3902 and Acad10

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:XP_038946087.1 Gene:Acad10 / 304500 RGDID:1310159 Length:1120 Species:Rattus norvegicus


Alignment Length:381 Identity:104/381 - (27%)
Similarity:173/381 - (45%) Gaps:55/381 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SATGLPPPLTFLTDDEKMMKETVAKLAQEQIQPLVKKMDFEH-----KFDPSVV------KAVFE 79
            |..||.|.:..|.|.       :.:..::::.|:..::. .|     ::.||.:      ||..|
  Rat   655 SPEGLSPRVRKLYDQ-------LLQFMEQKVYPVETELQ-RHQASADRWSPSPLIEDLKEKAQAE 711

  Fly    80 ---NGLMGIEIDTELG-GSGCNFMTNIVVVEELSKIDPAVAAFVDIHN-----TLVNSLMIKFGN 135
               |..:.:|.|.|.. |:|   :||:........:..::.| .:|.|     |....:::::|.
  Rat   712 GLWNLFLPLETDPERKYGAG---LTNVEYAHLCEVMGMSLYA-SEIFNCSAPDTGNMEILVRYGT 772

  Fly   136 AEQKAKYL-PKLAQEYAGSFALTEPG-AGSDAFSLKTVAKKDGSHYVINGSKMWISNSDVAGVF- 197
            .||||::| |.|.......||:|||. |.|||.:::...|::...|||||.|.|||     |:. 
  Rat   773 EEQKARWLAPLLEGRIRSCFAMTEPQVASSDASNIEASIKEEDGSYVINGHKWWIS-----GILD 832

  Fly   198 ------LIFANAKPE-DGYRGITTFIVDRETPGLIVNKPEDKLGIR--ASGTCQLTFDNVRVPEE 253
                  :......|: ..::..:..:|..:|||:.|.:|....|:.  ..|..::.|.:||||:|
  Rat   833 PRCKLCVFMGKTDPQAPRHQQQSMLLVPMDTPGIKVIRPLSVFGLEDPPGGHGEVQFKDVRVPKE 897

  Fly   254 NILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIAT 318
            |||...|.|::.|.|.|..|||....:::|.::...:.....::.|..||..:....::...||.
  Rat   898 NILLGPGRGFEIAQGRLGPGRIHHCMRLIGYSERALELMKTRVMSRTAFGKPLVEHGTILADIAR 962

  Fly   319 VATEIEAARLMTYNAARLQEQGVPFQK----EAAMAKYYASEVAQRAAIKCVDWMG 370
            ...:||.|||:...||.|.:  |...|    |.||.|..|..:|.|...:.|..:|
  Rat   963 SRVDIEQARLLVLKAAHLMD--VAGNKAAALEIAMIKMVAPSMAYRVIDRAVQAVG 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 100/370 (27%)
SCAD_SBCAD 39..410 CDD:173847 99/368 (27%)
Acad10XP_038946087.1 HAD-1A3-hyp 41..247 CDD:274054
PLN02876 257..1016 CDD:215473 103/379 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.