DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3902 and Acoxl

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:XP_017447070.1 Gene:Acoxl / 296138 RGDID:1306814 Length:656 Species:Rattus norvegicus


Alignment Length:370 Identity:86/370 - (23%)
Similarity:147/370 - (39%) Gaps:59/370 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 NFMT-NIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYL-PKLAQEYAGSFALTEP 159
            ||:: :.|:.|.|..:|.:::....:...|....:...|:.|...|:. |...|:|.|.||:||.
  Rat    81 NFISQSFVLGEVLCMVDVSMSIKCGVIFLLFGGAVNNLGSPEHVIKWFRPLKEQKYTGMFAMTEK 145

  Fly   160 GAGSDAFSLKTVA--KKDGSHYVI-----NGSKMWISNSDVAGVFLIFANAKPEDGYRGITTFIV 217
            |.||:...::|.|  ..|...:||     |..||:|.|:.......:||....|...:|...|||
  Rat   146 GHGSNIRGIQTEATFDCDSQEFVIDMPCENAQKMYIGNAMHGNYAAVFAQLIIEGKSQGPHCFIV 210

  Fly   218 D-RET-----PGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFG--------HG------ 262
            . |:.     ||:.......|.|:.......|.||.||:|.||:|...|        |.      
  Rat   211 PIRDENGNLYPGVTAIDMMYKEGLNGVDNGILIFDKVRIPRENMLDKLGSVTPDGQYHSPIQSKS 275

  Fly   263 --YKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVATEIEA 325
              :......|...|:.:..|.:|..:......|.|...|:|||      ...:.::..:..:::|
  Rat   276 ARFNAMLAILTPSRLAVTFQAMGAMKLGLMIAIRYSHSRRQFG------PKGKEEVKIIEHQMQA 334

  Fly   326 ARLMTY------------NAARLQEQGVPFQKE--------AAMA--KYYASEVAQRAAIKCVDW 368
            .|||::            :|..:.::.:...:|        |.||  |.|::....|....|.:.
  Rat   335 LRLMSHLATALALTFTSRHAGHILDEDILQGRELINRRSLQALMAGLKAYSTWETVRCLQDCREC 399

  Fly   369 MGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKKDYA 413
            .||:|:..:........|..:...:||...:.|..:|:.:...|:
  Rat   400 TGGMGYMMENRLSGLKCDTDVFVTFEGDNVVMLQVVARELLAQYS 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 86/370 (23%)
SCAD_SBCAD 39..410 CDD:173847 85/365 (23%)
AcoxlXP_017447070.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.