DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3902 and Acad9

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_861433.2 Gene:Acad9 / 294973 RGDID:727973 Length:625 Species:Rattus norvegicus


Alignment Length:377 Identity:134/377 - (35%)
Similarity:204/377 - (54%) Gaps:30/377 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 KLAQEQIQ-------PLVK---------KMDFEHKFDPSVVKAVFENGLMGIEIDTELGGSGCNF 98
            :::||::.       ||.|         |:|.|.|.....:..:...||.||::..|.||.|   
  Rat    62 EVSQEELSEINQFVGPLEKFFNEEVDSRKIDQEGKIPADTLAKLKSLGLFGIQVPEEYGGLG--- 123

  Fly    99 MTNIVVVE--ELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYLPKLAQ-EYAGSFALTEPG 160
            ::|.:...  |:..:|.::...:..|..:....:|..||.||||||||||:. |:..:|.||||.
  Rat   124 LSNTMYARLGEIISMDASITVTLAAHQAIGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPA 188

  Fly   161 AGSDAFSLKTVA--KKDGSHYVINGSKMWISNSDVAGVFLIFANAKPEDGYRGI----TTFIVDR 219
            :||||.|::|.|  .:|..::|:||||:||:|..:|.:|.:||..:..|....|    |.|||:|
  Rat   189 SGSDAASIQTRATLSEDKKYFVLNGSKVWITNGGLANIFTVFAKTEVVDSDGSIKDKMTAFIVER 253

  Fly   220 ETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGHGYKYAAGFLNEGRIGIAAQMVGL 284
            :..|:...|||||||||.|.||::.|:|.|||.||:||..|.|:|.|...||.||..:.:.:.|:
  Rat   254 DFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRFSMGSAVAGM 318

  Fly   285 AQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTY-NAARLQEQGVP-FQKEA 347
            .:...:.|..|...||||...:..|..:|.:.|.:|.:......|.| .:..|.:.|.| ...||
  Rat   319 LKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGFPDCSIEA 383

  Fly   348 AMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNM 399
            ||.|.::||.|.:...:.:..:||.|:.:|:|.|:..||.:|..|:|||..:
  Rat   384 AMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEI 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 134/377 (36%)
SCAD_SBCAD 39..410 CDD:173847 134/377 (36%)
Acad9NP_861433.2 VLCAD 42..449 CDD:173850 134/377 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.