DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and Acadm

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_058682.2 Gene:Acadm / 24158 RGDID:2012 Length:421 Species:Rattus norvegicus


Alignment Length:386 Identity:137/386 - (35%)
Similarity:203/386 - (52%) Gaps:16/386 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PPLTF---LTDDEKMMKETVAKLAQEQIQPLVKKMDFEHKFDPSVVKAVFENGLMGIEIDTELGG 93
            |.|.|   ||:.:|..:....|.|:|:|.|:....|...::...::|..:|.||:...|....||
  Rat    33 PGLGFSFELTEQQKEFQTIARKFAREEIIPVAPDYDKSGEYPFPLIKRAWELGLINTHIPESCGG 97

  Fly    94 SGCNFMTNIVVVEEL----SKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYLPKLAQE-YAGS 153
            .|.......::.|||    :.:..|:.|     |:|....:|..||.:||.|||.::.:: ...:
  Rat    98 LGLGTFDACLITEELAYGCTGVQTAIEA-----NSLGQMPVIIAGNDQQKKKYLGRMTEQLMMCA 157

  Fly   154 FALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSDVAGVFLIFANAKPE---DGYRGITTF 215
            :.:|||.||||...:||.|:|.|..|||||.||||:|...|..:.:...:.|:   ...:..|.|
  Rat   158 YCVTEPSAGSDVAGIKTKAEKKGDEYVINGQKMWITNGGKANWYFVLTRSNPDPKVPASKAFTGF 222

  Fly   216 IVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGHGYKYAAGFLNEGRIGIAAQ 280
            ||:.:|||:.:.|.|..:|.|.|.|..:||::||||:||:|...|.|:|.|.|..:..|..:||.
  Rat   223 IVEADTPGIHIGKKELNMGQRCSDTRGITFEDVRVPKENVLIGEGAGFKIAMGAFDRTRPTVAAG 287

  Fly   281 MVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQK 345
            .|||||...|....|.|:||.||..:...|.:...:|.:|.::|.|||....||...:.|.....
  Rat   288 AVGLAQRALDEATKYALDRKTFGKLLVEHQGVSFLLAEMAMKVELARLSYQRAAWEVDSGRRNTY 352

  Fly   346 EAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAK 406
            .|::||.:|.::|.:.|...|...||.||..::|.||..||.||..|||||..:|...||:
  Rat   353 FASIAKAFAGDIANQLATDAVQIFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIAR 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 134/378 (35%)
SCAD_SBCAD 39..410 CDD:173847 132/376 (35%)
AcadmNP_058682.2 CaiA 39..420 CDD:224871 134/380 (35%)
MCAD 41..418 CDD:173846 134/378 (35%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P41367 278..281 0/2 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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