DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acox-1.3

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_493263.1 Gene:acox-1.3 / 184167 WormBaseID:WBGene00008566 Length:660 Species:Caenorhabditis elegans


Alignment Length:457 Identity:95/457 - (20%)
Similarity:170/457 - (37%) Gaps:104/457 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LANAARQQSAAMSSATGL--PPPLTFLTDDEKMMKETVAKLAQEQIQPLVKKMDFEHKFDPSVVK 75
            :|:..||.:.::|....|  ..||.|:|.:|| :.|:..||  |.:.....:..|....:...:.
 Worm    36 IASRRRQLTESISRIHELAESKPLVFMTREEK-IAESCRKL--EVLSRHWNQTPFNRDNEEDALH 97

  Fly    76 AVFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKA 140
            ...|  ::|:|                             ...:.:|:|:....::...:.||:.
 Worm    98 IYRE--VLGME-----------------------------GHPLALHDTMFIPTLVAQASQEQQE 131

  Fly   141 KYLPKL-AQEYAGSFALTEPGAGSDAFSLKTVA--KKDGSHYVIN-----GSKMW------ISNS 191
            |:|.:. .:|..|.:|.||.|.|::...|:|.|  ..|...:::|     ..|.|      .||:
 Worm   132 KWLGRARRKEIIGCYAQTEMGHGTNLRKLETTATYSPDTQEFILNTPTITALKWWPGALGKSSNN 196

  Fly   192 DVAGVFLIFANAKPEDGYRGITTFIV---DRET----PGLIVNKPEDKLGIRASGTCQLTFDNVR 249
            .:     :.||...:|...|...|:|   |.:|    .|::|.....|:....:....|.|:|.|
 Worm   197 AI-----VVANLLIKDQNYGPHPFMVQLRDEKTHIPLKGIVVGDIGPKMAFNGADNGYLGFNNHR 256

  Fly   250 VPEENILGTFGHGYKYAAGFL---NEGRIGIAAQM-----VGLAQGTFDAT-----IPY------ 295
            :|..|:|  ..|....|.|..   :..:||.::.:     :.:.||.|.|:     :.|      
 Worm   257 IPRTNLL--MRHTKVEANGTYIKPSHAKIGYSSMVKVRSRMAMDQGLFLASALVIAVRYSAVRRQ 319

  Fly   296 -LLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQ---GVPFQKEAAMAKYYA-- 354
             .||.|.....:.::|:.||::........|.....:....|..|   .|.....:.||..:|  
 Worm   320 GFLEDKTQKVKVLDYQTQQHRLFPSLARAYAFIFTGFETIHLYSQLLKDVDMGNTSGMADLHALT 384

  Fly   355 -----------SEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCI 408
                       .|..::|.:.|    |..|::......:.|.....|..|||...:.|..:|:.:
 Worm   385 SGLKSVVTHQTGEGIEQARMAC----GEHGYSMASYISEIYGVAIGGCTYEGENMVMLLQLARYL 445

  Fly   409 KK 410
            .|
 Worm   446 VK 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 87/431 (20%)
SCAD_SBCAD 39..410 CDD:173847 85/427 (20%)
acox-1.3NP_493263.1 ACAD 11..634 CDD:299127 95/457 (21%)
PLN02443 12..657 CDD:178062 95/457 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163670
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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