DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acox-1.6

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_510603.2 Gene:acox-1.6 / 181668 WormBaseID:WBGene00010336 Length:667 Species:Caenorhabditis elegans


Alignment Length:444 Identity:93/444 - (20%)
Similarity:164/444 - (36%) Gaps:117/444 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PPPLTFLTDDEKMMKETVAKLAQEQIQPLVKKMDFEHKFDPSVVKAVFENGL--MGIEIDTELGG 93
            |.|..|::.:|:::......:|.......:...||            |..|:  ..:.:..:|..
 Worm    57 PVPTEFMSREERILNNARKVVAMTNNTDQIDGSDF------------FGEGMYYQALTMGRDLHA 109

  Fly    94 SGCNFMTNIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYLPK-LAQEYAGSFALT 157
            ...:::..|          |.:....|               .:|..::|.| :::...|::|.|
 Worm   110 MSLHYVMFI----------PTLQGQTD---------------DDQLDEWLTKAISRAVVGTYAQT 149

  Fly   158 EPGAGSDAFSLKTVAKKDGS--HYVIN-----GSKMWI----SNSDVAGVFLIFANAKPEDGYRG 211
            |.|.|::...|:|.|..|.:  .:|:|     .:|.|.    .:|:.|   ::.|....:...:|
 Worm   150 ELGHGTNLSKLETTATYDPATEEFVMNSPTITAAKWWPGGLGKSSNYA---VVVAQLYTKGECKG 211

  Fly   212 ITTFIV---DRET----PGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENIL---------GTF- 259
            ...|||   |.:|    .|:.:.....||||..:....|.||.||:|.:.:|         ||: 
 Worm   212 PHPFIVQLRDEDTHYPLKGIRLGDIGPKLGINGNDNGFLLFDKVRIPRKALLMRYAKVNPDGTYI 276

  Fly   260 -------GHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGD--------AIYNF 309
                   |:|   ...|:..  |.|..|...||.....|| .|...|:| |:        .|.::
 Worm   277 APAHSKLGYG---TMVFVRS--IMIKDQSTQLAAAATIAT-RYAAVRRQ-GEITPGKGEVQIIDY 334

  Fly   310 QSMQHQI----------ATVATEIE------AARLMTYNAARLQEQGVPFQKEAAMAKYYASEVA 358
            |:.|.::          ...||||.      ..:|...|...|.|..|......::..:..::..
 Worm   335 QTQQFRVFPQLARAFAFMAAATEIRDLYMTVTEQLTHGNTELLAELHVLSSGLKSLVSWDTAQGI 399

  Fly   359 QRAAIKCVDWMGGVGFTR--DFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIKK 410
            ::..:.|    ||.|:::  .||:  .|.....|..|||...:.|..:|:.:.|
 Worm   400 EQCRLAC----GGHGYSQASGFPE--IYGYAVGGCTYEGENIVMLLQVARFLMK 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 90/438 (21%)
SCAD_SBCAD 39..410 CDD:173847 89/434 (21%)
acox-1.6NP_510603.2 PLN02443 8..661 CDD:178062 93/444 (21%)
ACAD 12..639 CDD:299127 93/444 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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