DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acdh-13

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_501452.1 Gene:acdh-13 / 177654 WormBaseID:WBGene00001566 Length:617 Species:Caenorhabditis elegans


Alignment Length:476 Identity:104/476 - (21%)
Similarity:187/476 - (39%) Gaps:111/476 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MNSLKKLPVRMLANAARQQSAA---------------------MSSATG-----------LPPPL 34
            :..|.|..||.|::||:.:..|                     .|.:.|           :.|..
 Worm     8 LQKLHKCNVRCLSDAAKSKEVAGISEKSKFAIRTLDNTSSIEKRSLSRGFAMNKFEKDFMIYPEY 72

  Fly    35 TFLTDDEKMMKETVAKLAQE-QIQPLVKKMDFEHKFDPSVVKAVFENGLMGIEIDTELGGSG-CN 97
            |. :||.:.::..|..|.:. ::....|.::.|.|.....::|:..|.:..:.|.....|.| ||
 Worm    73 TD-SDDVRNIEGFVDVLRKSLELSVDSKLIEKEGKLASDTIEALRSNAIFSLAIGKYFDGIGMCN 136

  Fly    98 FMTNIVVVEELSKIDPAVAAFVDIHNT-----LVNSLMIKFGNAEQKAKYL---------PKLAQ 148
                    ::|||:...::...:::.|     ||.:::..:|:.|||:|||         |.:|.
 Worm   137 --------KDLSKVFEELSVDWNVYTTSHISLLVANILTIYGSDEQKSKYLGILGSGKLRPAVAI 193

  Fly   149 EYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSDVAGVFLIFANAKPEDGYRGIT 213
            ....:..:.|..||            .|...::||..:.:.....|..:::|.|...|.     |
 Worm   194 VKDTNGGVCEQTAG------------PGGKSMLNGQNIRVMGHHNANFYVVFGNNNGEK-----T 241

  Fly   214 TFIVDRE---TPGLIVNKPEDKLGIRA--SGTCQLTFDNVRVPEENILGTFGHGYKYAAGFLNEG 273
            .|::|..   |...|....::.:|::.  .|..:||   ..|.::|:|||.|||.:.|:..:..|
 Worm   242 CFLLDEAELGTTDKIQFTRDETIGLKGIDVGRIELT---ALVTDKNLLGTPGHGSEIASELVGSG 303

  Fly   274 RIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMT-------- 330
            |:..||..:|:|:...          ::.........|.|:...|:|.:..:.|::|        
 Worm   304 RMPFAAATIGMARRAL----------RELSIWCNRTPSRQNDRTTLADDSRSQRIVTELALKVYA 358

  Fly   331 -----YNAARLQEQG--VPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVK 388
                 |..:.|.::|  |....|.::......:|.|......::.:|.......||.||.:|||.
 Worm   359 LESSLYYLSGLIDEGLSVVVDIENSLLSIMTRDVLQAVISAQLELVGVAASDASFPHEKLFRDVT 423

  Fly   389 --IGAIYEGTTNMQ--LSTIA 405
              :..|.||....|  |:|||
 Worm   424 TLLSIIDEGADVEQIGLATIA 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 92/409 (22%)
SCAD_SBCAD 39..410 CDD:173847 92/407 (23%)
acdh-13NP_501452.1 ACAD 57..434 CDD:299127 89/415 (21%)
CaiA 102..437 CDD:224871 82/372 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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