DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and ivd-1

DIOPT Version :10

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_500720.1 Gene:ivd-1 / 177281 WormBaseID:WBGene00015326 Length:419 Species:Caenorhabditis elegans


Alignment Length:418 Identity:134/418 - (32%)
Similarity:226/418 - (54%) Gaps:6/418 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MNSL-KKLPVRMLANAARQQSAAMS--SATGLPPPLTFLTDDEKMMKETVAKLAQEQIQPLVKKM 63
            |::| .||..:..|.....||.|:.  ||..:...:..|.|:|..:::::.:.|.:::.|...|:
 Worm     1 MSALASKLFAKCAAGGRALQSQAVRQFSAYPIDDSMFGLNDEEIALRQSIRQFADKELAPYADKI 65

  Fly    64 DFEHKFDP--SVVKAVFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNTLV 126
            |.::.:|.  ...|.:.:.||:||....|.||||.|:.::::.:||||:....:|.....|:.|.
 Worm    66 DKDNGWDQLRPFWKKLGDQGLLGITAPAEYGGSGMNYFSHVIAMEELSRAAGGIALSYGAHSNLC 130

  Fly   127 NSLMIKFGNAEQKAKYLPKL-AQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISN 190
            .:.:::.|:.||:.|||||| :.|:.|:.|::|..||||..|:|..|:|.|..||:||:|.||:|
 Worm   131 INQIVRNGSEEQRKKYLPKLISGEHMGALAMSEAQAGSDVVSMKLRAEKKGDKYVLNGTKFWITN 195

  Fly   191 SDVAGVFLIFANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENI 255
            ...|.|.:::|...|.....|||.|:|::.|||...:...||||:|.|.||:|.|||..:.|..|
 Worm   196 GPDADVLVVYAKTDPSKHQHGITCFLVEKNTPGFSQSPKLDKLGMRGSNTCELVFDNCEIHESQI 260

  Fly   256 LGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVA 320
            :|..|.|.......|:..|:.::...:||.|...|....|..:|..||..|.:||.:|.::|.:.
 Worm   261 MGGKGKGVYVLMTGLDYERLVLSGGPLGLMQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMY 325

  Fly   321 TEIEAARLMTYNAARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYR 385
            |.:.|:|...|..|:..::|....|:.|....|.:|...:..:..:..:||.|:..|:|..:..|
 Worm   326 TTLNASRSYLYMVAKAADKGNVSNKDCAGVILYVAEKCTQVCLDAIQILGGNGYINDYPAGRLLR 390

  Fly   386 DVKIGAIYEGTTNMQLSTIAKCIKKDYA 413
            |.|:..|..||:.::...|.:.:.|:|:
 Worm   391 DAKLYEIGAGTSEVRRLIIGRALNKEYS 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 SCAD_SBCAD 39..410 CDD:173847 121/373 (32%)
ivd-1NP_500720.1 IVD 38..415 CDD:173845 122/376 (32%)

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