DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and ivd-1

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_500720.1 Gene:ivd-1 / 177281 WormBaseID:WBGene00015326 Length:419 Species:Caenorhabditis elegans


Alignment Length:418 Identity:134/418 - (32%)
Similarity:226/418 - (54%) Gaps:6/418 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MNSL-KKLPVRMLANAARQQSAAMS--SATGLPPPLTFLTDDEKMMKETVAKLAQEQIQPLVKKM 63
            |::| .||..:..|.....||.|:.  ||..:...:..|.|:|..:::::.:.|.:::.|...|:
 Worm     1 MSALASKLFAKCAAGGRALQSQAVRQFSAYPIDDSMFGLNDEEIALRQSIRQFADKELAPYADKI 65

  Fly    64 DFEHKFDP--SVVKAVFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNTLV 126
            |.::.:|.  ...|.:.:.||:||....|.||||.|:.::::.:||||:....:|.....|:.|.
 Worm    66 DKDNGWDQLRPFWKKLGDQGLLGITAPAEYGGSGMNYFSHVIAMEELSRAAGGIALSYGAHSNLC 130

  Fly   127 NSLMIKFGNAEQKAKYLPKL-AQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISN 190
            .:.:::.|:.||:.|||||| :.|:.|:.|::|..||||..|:|..|:|.|..||:||:|.||:|
 Worm   131 INQIVRNGSEEQRKKYLPKLISGEHMGALAMSEAQAGSDVVSMKLRAEKKGDKYVLNGTKFWITN 195

  Fly   191 SDVAGVFLIFANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENI 255
            ...|.|.:::|...|.....|||.|:|::.|||...:...||||:|.|.||:|.|||..:.|..|
 Worm   196 GPDADVLVVYAKTDPSKHQHGITCFLVEKNTPGFSQSPKLDKLGMRGSNTCELVFDNCEIHESQI 260

  Fly   256 LGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVA 320
            :|..|.|.......|:..|:.::...:||.|...|....|..:|..||..|.:||.:|.::|.:.
 Worm   261 MGGKGKGVYVLMTGLDYERLVLSGGPLGLMQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMY 325

  Fly   321 TEIEAARLMTYNAARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYR 385
            |.:.|:|...|..|:..::|....|:.|....|.:|...:..:..:..:||.|:..|:|..:..|
 Worm   326 TTLNASRSYLYMVAKAADKGNVSNKDCAGVILYVAEKCTQVCLDAIQILGGNGYINDYPAGRLLR 390

  Fly   386 DVKIGAIYEGTTNMQLSTIAKCIKKDYA 413
            |.|:..|..||:.::...|.:.:.|:|:
 Worm   391 DAKLYEIGAGTSEVRRLIIGRALNKEYS 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 124/380 (33%)
SCAD_SBCAD 39..410 CDD:173847 121/373 (32%)
ivd-1NP_500720.1 IVD 38..415 CDD:173845 122/376 (32%)
PLN02519 39..416 CDD:215284 122/376 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 1 1.000 - - FOG0000508
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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