DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3902 and F54D5.7

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001369890.1 Gene:F54D5.7 / 174768 WormBaseID:WBGene00010052 Length:409 Species:Caenorhabditis elegans


Alignment Length:412 Identity:125/412 - (30%)
Similarity:210/412 - (50%) Gaps:24/412 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SLKKLPVRMLANAARQQSAAMSSATGLPPPLTFLTDDEKMMKETVAKLAQEQIQPLVKKMDFEHK 68
            |:.|:..|.|::...|.:..:|..         ||:||:.:..:..:..||::.|.|.:.....|
 Worm     8 SIGKIASRGLSSTFYQDAFQLSDQ---------LTEDERSLMLSAREYCQERLLPRVTEAYRTEK 63

  Fly    69 FDPSVVKAVFENGLMGIEIDTELGGSGCNFMTNI---VVVEELSKIDPAVAAFVDIHNTLVNSLM 130
            ||||::..:...||:|....    |.||...:.:   ::..|:.::|....:.:.:..:||...:
 Worm    64 FDPSLIPEMGSMGLLGAPYQ----GYGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPI 124

  Fly   131 IKFGNAEQKAKYLPKLAQ-EYAGSFALTEPGAGSDAFSLKTVAKKDGS--HYVINGSKMWISNSD 192
            ..:|:.:||.||:|.||. :..|.|.||||..||:...::|.|..|.:  .|.:||||.|||||.
 Worm   125 YNYGSEDQKQKYIPDLASGKKIGCFGLTEPNHGSNPGGMETKATWDETTKTYKLNGSKTWISNSP 189

  Fly   193 VAGVFLIFA-NAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENIL 256
            |:.|.:::| :|:..:..:|   ||::|...||...|.|.||.:|||.|.|:..|:|.|||||:|
 Worm   190 VSDVMVVWARSARHNNKIKG---FILERGMKGLTTPKIEGKLSLRASITGQIAMDDVPVPEENLL 251

  Fly   257 GTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVAT 321
            .. ..|.:...|.||..|:|||...:|.|:..|.....|.|:|:|||..:...|.||.::|.:.|
 Worm   252 PN-AEGLQGPFGCLNNARLGIAWGALGAAEECFHLARQYTLDRQQFGRPLAQNQLMQLKMADMLT 315

  Fly   322 EIEAARLMTYNAARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRD 386
            ||..........:||:::|....::.::.|..:...|...|.|..|.:||.|...::...::..:
 Worm   316 EISLGLQGCLRVSRLKDEGKVQSEQISIIKRNSCGKALEVARKARDMLGGNGIVDEYHIMRHMVN 380

  Fly   387 VKIGAIYEGTTNMQLSTIAKCI 408
            ::....||||.::....:.:.|
 Worm   381 LETVNTYEGTHDVHALILGRAI 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 119/379 (31%)
SCAD_SBCAD 39..410 CDD:173847 117/377 (31%)
F54D5.7NP_001369890.1 GCD 20..408 CDD:173840 121/400 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.