DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acdh-12

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001022062.1 Gene:acdh-12 / 174180 WormBaseID:WBGene00017125 Length:613 Species:Caenorhabditis elegans


Alignment Length:382 Identity:131/382 - (34%)
Similarity:201/382 - (52%) Gaps:17/382 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PPPLTFLTDDEK----MMKETVAKLAQEQIQPLVKKMDFEHKFDPSVVKAVFENGLMGIEIDTEL 91
            |.||. :||::|    |:...:.|:..| :..:||. |.......:|:....|.|..|:.:..||
 Worm    58 PYPLN-MTDEQKETLGMVMSPLEKMLVE-VNDVVKN-DETSDIPRAVLDQFAELGTFGVLVPPEL 119

  Fly    92 GGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYLPKLA--QEYAGSF 154
            .|||.|......|.|.:...|......:..|.::....::..|...||.||||.||  :::| :|
 Worm   120 EGSGFNNSQMARVAEIVGAYDLGFGVVMGAHQSIGYKGILLEGTDAQKQKYLPDLATGRKFA-AF 183

  Fly   155 ALTEPGAGSDAFSLKTVAK--KDGSHYVINGSKMWISNSDVAGVFLIFAN--AKPEDGYR--GIT 213
            |||||..||||.|::|.|:  .||.|||:||.|:||||...|.||.:||.  .|..||..  .::
 Worm   184 ALTEPTTGSDASSVRTRAELSADGKHYVLNGGKIWISNGGFADVFTVFAQTPVKQADGSTKDKMS 248

  Fly   214 TFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGHGYKYAAGFLNEGRIGIA 278
            .|||:|...|:.....|.|:||:.|.|.::.|||:::|.||:||..|.|:|.|...||.||.||.
 Worm   249 AFIVERAFGGVTSGPQEKKMGIKGSNTTEVHFDNLKIPVENLLGKEGEGFKVAMNILNNGRFGIP 313

  Fly   279 AQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQGV-P 342
            |...|..:.....|:.::..|.|||..:..|.::|.::..:.:::.|...:.|..:...::|: .
 Worm   314 AACTGAMKHCIQKTVDHITTRVQFGKKLQEFGNIQEKLVEMISKLYATESIVYMLSSNMDRGIKE 378

  Fly   343 FQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNM 399
            :|.|||:.|..|||.|.......:...||:||.|:...|:..||::|..|:||..::
 Worm   379 YQLEAAIGKVLASENAWLVCDDAIQVHGGMGFMRETGLERVLRDLRIFRIFEGANDV 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 128/376 (34%)
SCAD_SBCAD 39..410 CDD:173847 127/374 (34%)
acdh-12NP_001022062.1 VLCAD 41..449 CDD:173850 131/382 (34%)
CaiA 61..441 CDD:224871 129/379 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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