DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acdh-2

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001343623.1 Gene:acdh-2 / 173940 WormBaseID:WBGene00015894 Length:386 Species:Caenorhabditis elegans


Alignment Length:414 Identity:188/414 - (45%)
Similarity:268/414 - (64%) Gaps:44/414 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KKLPVRMLAN-------AARQQSAAMSSATGLPPPLTFLTDDEKMMKETVAKLAQEQIQPLVKKM 63
            :|||:..::.       :|:||....        ||..|.::||.:.|.|...||..::|||::|
 Worm     6 RKLPISAISTFSTTGSISAQQQPRVF--------PLQHLNENEKKLVEKVKNFAQSSVKPLVREM 62

  Fly    64 DFEHKFDPSVVKAVFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNTLVNS 128
            |.:.:.:..::|..|:..|||::||.:.||||.:|...::.||||||||||:|..:.:.|.||..
 Worm    63 DRDARINKQLLKKAFDLKLMGLKIDPKYGGSGVSFFELVLAVEELSKIDPAIALIMHLQNALVAP 127

  Fly   129 LMIKFGNAEQKAKYLPKLAQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSDV 193
            |:.:|||.|.|.|||.||.::..|:|||:|..:|||||:::|||||||.|:::||||..|||:.:
 Worm   128 LIEEFGNEELKEKYLKKLCKDSVGAFALSEVVSGSDAFAMQTVAKKDGDHFILNGSKWGISNAPI 192

  Fly   194 AGVFLIFANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGT 258
            |..||:.|||.||.||||:|.|||||:..|:::.:.:|.||:||....|:..::||||:.:|:|.
 Worm   193 ADFFLVLANADPEKGYRGVTCFIVDRDHEGVVLGEQDDNLGMRAGTIAQVHLNSVRVPKTSIVGE 257

  Fly   259 FGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVATEI 323
            :|.|||||...||..||.|.|||                             .:|||||.:.|||
 Worm   258 YGKGYKYAIEVLNASRIVIGAQM-----------------------------GLQHQIAKIQTEI 293

  Fly   324 EAARLMTYNAARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVK 388
            ||||||.||.||:::.|:||.|||:||||||.|||.:...:|::|:||||||::|..||:|||..
 Worm   294 EAARLMVYNCARMKDCGMPFVKEASMAKYYAPEVACKTTKQCIEWLGGVGFTKNFMAEKFYRDAV 358

  Fly   389 IGAIYEGTTNMQLSTIAKCIKKDY 412
            :|.|||||:|:||:||||.|..::
 Worm   359 VGGIYEGTSNIQLNTIAKFIDNEF 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 180/376 (48%)
SCAD_SBCAD 39..410 CDD:173847 179/370 (48%)
acdh-2NP_001343623.1 ACAD 38..379 CDD:324545 178/369 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163675
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1951
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D331445at33208
OrthoFinder 1 1.000 - - FOG0000508
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43884
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.900

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