DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acox-1.4

DIOPT Version :10

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_493264.1 Gene:acox-1.4 / 173164 WormBaseID:WBGene00008567 Length:662 Species:Caenorhabditis elegans


Alignment Length:456 Identity:100/456 - (21%)
Similarity:164/456 - (35%) Gaps:109/456 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 TFLTD--------DEKM------MKETVAK---LAQEQIQPLVKKMDFEHKFDPSVVKAVFENGL 82
            ||.||        .||:      :.|.|:|   ||..|..|.:.::  |...:.|....|..|.:
 Worm    23 TFDTDKMAAVIYGSEKLARRRREISEAVSKIPELADTQPFPFMDRL--EKITEGSRKLEVLNNNI 85

  Fly    83 MGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYLPKL- 146
            ..| ||.:..|.      .:.:.:|::.::....|   :|..:....::...:.||:.|:|.:. 
 Worm    86 RDI-IDYDDNGE------RLHIYQEVTGMEGHPLA---LHEVMFIPALVSQASKEQQEKWLGRAR 140

  Fly   147 AQEYAGSFALTEPGAGSDAFSLKTVAK--KDGSHYVIN-----GSKMW------ISNSDVAGVFL 198
            .:|..|.:|.||.|.|::...|:|.|.  .|...:|:|     ..|.|      .||..|..|.:
 Worm   141 RREIIGCYAQTEMGHGTNLRKLETTATYFPDTQEFVLNTPTTTALKWWPGALGKSSNYAVVVVDM 205

  Fly   199 IFANAKPEDGYRGITTFIV---DRET----PGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENIL 256
            |.....     .|...|:|   |.:|    .|::|.....|:.........|.||..|||..|:|
 Worm   206 IIKGKS-----YGPHPFMVQLRDEKTHIPLKGIVVGDIGPKMSFNGGDNGFLGFDKFRVPRTNLL 265

  Fly   257 ---------GTF--------GH-GYKYAAGFLNEGRIGIAAQMVGLA--------QGTFDATIPY 295
                     ||:        .| ...:....:..|:..:.||.:.:|        ||        
 Worm   266 MRHVRVEADGTYVKPPHAKVNHSAMVHVRSHMATGQGALLAQALIIAVRYSAVRRQG-------- 322

  Fly   296 LLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQ---GVPFQKEAAMAKYYA--- 354
            .||.|.....:.::|:.||::........|.....:....|..|   .|.....:.||..:|   
 Worm   323 FLENKTQEVKVLDYQTQQHRLFPSLARAYAFIFTGFETIHLYSQLLKDVDMGNTSGMADLHALTS 387

  Fly   355 ----------SEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIK 409
                      .|..::|.:.|    ||.|::......:.|.....|..|||...:.|..:|:.:.
 Worm   388 GLKSVVTHQTGEGIEQARMAC----GGHGYSMASYISEIYGIAIGGCTYEGENMVMLLQLARYLV 448

  Fly   410 K 410
            |
 Worm   449 K 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 SCAD_SBCAD 39..410 CDD:173847 96/450 (21%)
acox-1.4NP_493264.1 ACAD 13..636 CDD:447864 100/456 (22%)

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