DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acox-1.4

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_493264.1 Gene:acox-1.4 / 173164 WormBaseID:WBGene00008567 Length:662 Species:Caenorhabditis elegans


Alignment Length:456 Identity:100/456 - (21%)
Similarity:164/456 - (35%) Gaps:109/456 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 TFLTD--------DEKM------MKETVAK---LAQEQIQPLVKKMDFEHKFDPSVVKAVFENGL 82
            ||.||        .||:      :.|.|:|   ||..|..|.:.::  |...:.|....|..|.:
 Worm    23 TFDTDKMAAVIYGSEKLARRRREISEAVSKIPELADTQPFPFMDRL--EKITEGSRKLEVLNNNI 85

  Fly    83 MGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYLPKL- 146
            ..| ||.:..|.      .:.:.:|::.::....|   :|..:....::...:.||:.|:|.:. 
 Worm    86 RDI-IDYDDNGE------RLHIYQEVTGMEGHPLA---LHEVMFIPALVSQASKEQQEKWLGRAR 140

  Fly   147 AQEYAGSFALTEPGAGSDAFSLKTVAK--KDGSHYVIN-----GSKMW------ISNSDVAGVFL 198
            .:|..|.:|.||.|.|::...|:|.|.  .|...:|:|     ..|.|      .||..|..|.:
 Worm   141 RREIIGCYAQTEMGHGTNLRKLETTATYFPDTQEFVLNTPTTTALKWWPGALGKSSNYAVVVVDM 205

  Fly   199 IFANAKPEDGYRGITTFIV---DRET----PGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENIL 256
            |.....     .|...|:|   |.:|    .|::|.....|:.........|.||..|||..|:|
 Worm   206 IIKGKS-----YGPHPFMVQLRDEKTHIPLKGIVVGDIGPKMSFNGGDNGFLGFDKFRVPRTNLL 265

  Fly   257 ---------GTF--------GH-GYKYAAGFLNEGRIGIAAQMVGLA--------QGTFDATIPY 295
                     ||:        .| ...:....:..|:..:.||.:.:|        ||        
 Worm   266 MRHVRVEADGTYVKPPHAKVNHSAMVHVRSHMATGQGALLAQALIIAVRYSAVRRQG-------- 322

  Fly   296 LLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQ---GVPFQKEAAMAKYYA--- 354
            .||.|.....:.::|:.||::........|.....:....|..|   .|.....:.||..:|   
 Worm   323 FLENKTQEVKVLDYQTQQHRLFPSLARAYAFIFTGFETIHLYSQLLKDVDMGNTSGMADLHALTS 387

  Fly   355 ----------SEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKCIK 409
                      .|..::|.:.|    ||.|::......:.|.....|..|||...:.|..:|:.:.
 Worm   388 GLKSVVTHQTGEGIEQARMAC----GGHGYSMASYISEIYGIAIGGCTYEGENMVMLLQLARYLV 448

  Fly   410 K 410
            |
 Worm   449 K 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 98/454 (22%)
SCAD_SBCAD 39..410 CDD:173847 96/450 (21%)
acox-1.4NP_493264.1 PLN02443 9..659 CDD:178062 100/456 (22%)
ACAD 13..636 CDD:299127 100/456 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163672
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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