DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acox-1.2

DIOPT Version :10

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_493262.2 Gene:acox-1.2 / 173163 WormBaseID:WBGene00008565 Length:661 Species:Caenorhabditis elegans


Alignment Length:458 Identity:101/458 - (22%)
Similarity:164/458 - (35%) Gaps:112/458 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ARQQSAAMSSATGLP-----PPLTFLTDDEKMMKETVAKLAQEQIQPLVKKMDFEHKFDPSVVKA 76
            ||::.....:.:.:|     .|..|||.:||:.:.|      .:|..|.|               
 Worm    39 ARRRREITDAVSKIPELADIKPYPFLTREEKVTEGT------RKISILTK--------------- 82

  Fly    77 VFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAF----VDIHNTLVNSLMIKFGNAE 137
             :.|.|  |:.|.|               ||...:...|..:    ..:|:.|....:....:.|
 Worm    83 -YLNQL--IDRDNE---------------EESLHLHREVIGYEGHPFALHDALFIPTLQSQASDE 129

  Fly   138 QKAKYLPKL-AQEYAGSFALTEPGAGSDAFSLKTVAKKD--GSHYVIN-----GSKMW---ISNS 191
            |:.|:|.:. .:|..|.:|.||.|.||:..:|:|.|..|  ...:|::     ..|.|   :..|
 Worm   130 QQEKWLERARRREIIGCYAQTELGHGSNLRNLETTAVYDIASQEFVLHTPTTTALKWWPGALGKS 194

  Fly   192 DVAGVFLIFANAKPEDGYRGITTFIV---DRET----PGLIVNKPEDKLGIRASGTCQLTFDNVR 249
              ....|:.|....:....|...|:|   |.:|    .|:.|.....|:...|:....|..:|:|
 Worm   195 --CNYALVVAELIIKRNNYGPHFFMVQLRDEKTHIPLKGVTVGDIGPKMNFNAADNGYLGLNNLR 257

  Fly   250 VPEENIL---------GTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDA---TIPYL------ 296
            ||..|:|         ||:........|:  .|.:.|.:|| .:.||.|.|   ||...      
 Worm   258 VPRTNLLMRHCKVEADGTYVKPPHAKIGY--SGMVKIRSQM-AMEQGLFLAHALTIAARYSAVRR 319

  Fly   297 ---LERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQ---GVPFQKEAAMAKYYA- 354
               |:.||....:.::|:.||::........|.....:....|..|   .|.....:.||..:| 
 Worm   320 QGHLDDKQVEVKVLDYQTQQHRLFPSLARAYAFIFTGFETIHLYSQLLKDVDMGNTSGMADLHAL 384

  Fly   355 ------------SEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKC 407
                        .|..::|.:.|    ||.|::........|.....|..|||...:.|..:|:.
 Worm   385 TSGLKSVVAHETGEGIEQARMAC----GGHGYSMASYISVVYGIAIGGCTYEGENMVMLLQLARY 445

  Fly   408 IKK 410
            :.|
 Worm   446 LVK 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 SCAD_SBCAD 39..410 CDD:173847 93/429 (22%)
acox-1.2NP_493262.2 ACAD 12..635 CDD:447864 101/458 (22%)

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