DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acox-1.2

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_493262.2 Gene:acox-1.2 / 173163 WormBaseID:WBGene00008565 Length:661 Species:Caenorhabditis elegans


Alignment Length:458 Identity:101/458 - (22%)
Similarity:164/458 - (35%) Gaps:112/458 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ARQQSAAMSSATGLP-----PPLTFLTDDEKMMKETVAKLAQEQIQPLVKKMDFEHKFDPSVVKA 76
            ||::.....:.:.:|     .|..|||.:||:.:.|      .:|..|.|               
 Worm    39 ARRRREITDAVSKIPELADIKPYPFLTREEKVTEGT------RKISILTK--------------- 82

  Fly    77 VFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAF----VDIHNTLVNSLMIKFGNAE 137
             :.|.|  |:.|.|               ||...:...|..:    ..:|:.|....:....:.|
 Worm    83 -YLNQL--IDRDNE---------------EESLHLHREVIGYEGHPFALHDALFIPTLQSQASDE 129

  Fly   138 QKAKYLPKL-AQEYAGSFALTEPGAGSDAFSLKTVAKKD--GSHYVIN-----GSKMW---ISNS 191
            |:.|:|.:. .:|..|.:|.||.|.||:..:|:|.|..|  ...:|::     ..|.|   :..|
 Worm   130 QQEKWLERARRREIIGCYAQTELGHGSNLRNLETTAVYDIASQEFVLHTPTTTALKWWPGALGKS 194

  Fly   192 DVAGVFLIFANAKPEDGYRGITTFIV---DRET----PGLIVNKPEDKLGIRASGTCQLTFDNVR 249
              ....|:.|....:....|...|:|   |.:|    .|:.|.....|:...|:....|..:|:|
 Worm   195 --CNYALVVAELIIKRNNYGPHFFMVQLRDEKTHIPLKGVTVGDIGPKMNFNAADNGYLGLNNLR 257

  Fly   250 VPEENIL---------GTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDA---TIPYL------ 296
            ||..|:|         ||:........|:  .|.:.|.:|| .:.||.|.|   ||...      
 Worm   258 VPRTNLLMRHCKVEADGTYVKPPHAKIGY--SGMVKIRSQM-AMEQGLFLAHALTIAARYSAVRR 319

  Fly   297 ---LERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQ---GVPFQKEAAMAKYYA- 354
               |:.||....:.::|:.||::........|.....:....|..|   .|.....:.||..:| 
 Worm   320 QGHLDDKQVEVKVLDYQTQQHRLFPSLARAYAFIFTGFETIHLYSQLLKDVDMGNTSGMADLHAL 384

  Fly   355 ------------SEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQLSTIAKC 407
                        .|..::|.:.|    ||.|::........|.....|..|||...:.|..:|:.
 Worm   385 TSGLKSVVAHETGEGIEQARMAC----GGHGYSMASYISVVYGIAIGGCTYEGENMVMLLQLARY 445

  Fly   408 IKK 410
            :.|
 Worm   446 LVK 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 96/433 (22%)
SCAD_SBCAD 39..410 CDD:173847 93/429 (22%)
acox-1.2NP_493262.2 ACAD 12..635 CDD:299127 101/458 (22%)
PLN02443 14..658 CDD:178062 101/458 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163673
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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