DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acdh-5

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_491942.1 Gene:acdh-5 / 172400 WormBaseID:WBGene00016491 Length:442 Species:Caenorhabditis elegans


Alignment Length:415 Identity:118/415 - (28%)
Similarity:206/415 - (49%) Gaps:13/415 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NSLKKLPVRMLANAARQQSAAMSSA---TGLPPPLTFLTDDEK--MMKETVAKLAQEQIQPLVKK 62
            |:|.|.....|.|..|..|.|::|.   :..|.....:..||.  :|::::.||.:|:|.|.|.|
 Worm    20 NNLNKFRSSNLGNQRRSVSVAVTSTSPKSEKPVAREHMIYDETHFVMQKSLGKLIEEKINPNVAK 84

  Fly    63 MDFEHKFDPSVV-KAVFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKID-PAVAAFVDIHNTL 125
            .:.:.::...:| |.:.::|:.|:......||:|.:......:.|::..|: .::...|.:...:
 Worm    85 WEQDGRYPAHLVFKMLGDHGVFGVNKPEAFGGTGTDIAMATAIAEQMGAINCGSIPMSVMVQTDM 149

  Fly   126 VNSLMIKFGNAEQKAKYL-PKLAQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWIS 189
            ....:.:||:...:.::| |.:..:...|.|::||.||||..::.|.|::.||..:||||||||:
 Worm   150 STPALAQFGSDALRERFLRPSITGDLVSSLAVSEPHAGSDVSAVHTHARRQGSDLIINGSKMWIT 214

  Fly   190 NSDVAGVFLIFAN-AKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEE 253
            |...|....:..| :...:.::..:...|..:..|:..:.|.||||:|:|.|.||.|::||||..
 Worm   215 NGGQADWACVLVNTSNTSNVHKNKSLVCVPLDAVGVHRSTPLDKLGMRSSDTVQLFFEDVRVPSS 279

  Fly   254 NILGTFGHGYKYAAGFLNEGRIGIAAQMVGL--AQGTFDATIPYLLERKQFGDAIYNFQSMQHQI 316
            .|:|..|.|:.|.....|:.|:...|  |||  .|...|.||.|..:|..||..:.:.|.:|.|:
 Worm   280 YIIGEEGRGFGYQMKQFNDERLVTVA--VGLLPLQKCIDETIEYARDRLLFGKTLLDQQYIQFQL 342

  Fly   317 ATVATEIEAARLMTYNAARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQE 381
            |.:..|:||.|.:.|.....:.:|.......||||.....:|:....:|:...||.|:..:....
 Worm   343 AELEAELEATRALLYRTVLARSRGDDVSMLTAMAKLKIGRLARAITDQCLQVWGGAGYLNENGIS 407

  Fly   382 KYYRDVKIGAIYEGTTNMQLSTIAK 406
            :.:||.::.:|..|...:.:..|.|
 Worm   408 RAFRDFRLFSIGAGCDEVMMRIIHK 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 108/378 (29%)
SCAD_SBCAD 39..410 CDD:173847 108/376 (29%)
acdh-5NP_491942.1 CaiA 57..441 CDD:224871 108/378 (29%)
Acyl-CoA_dh_N 60..174 CDD:280866 24/113 (21%)
ACAD 149..430 CDD:173838 86/282 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589058at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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