DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acdh-4

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001300435.1 Gene:acdh-4 / 172367 WormBaseID:WBGene00020419 Length:385 Species:Caenorhabditis elegans


Alignment Length:345 Identity:192/345 - (55%)
Similarity:246/345 - (71%) Gaps:0/345 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RMLANAARQQSAAMSSATGLPPPLTFLTDDEKMMKETVAKLAQEQIQPLVKKMDFEHKFDPSVVK 75
            |::::.:...|:...:...:|.||..|::.|....:||.:.|...|:|||::||...:..|:|:.
 Worm    15 RLISSTSSLLSSKPRNEDDIPHPLQVLSEQETGFVKTVRQFADTVIKPLVREMDRTSEMTPAVIN 79

  Fly    76 AVFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKA 140
            ..|||||||||:..:.||.|..|....:|:||:||:|.:|.|.||:||||...|:|:.|..:||.
 Worm    80 GCFENGLMGIEVPEKYGGPGATFFDAALVIEEISKVDASVGAMVDVHNTLFIPLIIELGTEKQKE 144

  Fly   141 KYLPKLAQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSDVAGVFLIFANAKP 205
            |||||......|||||:|.|:|||||:|||.|||||..|||||||||||||:.:..||:||||.|
 Worm   145 KYLPKCYTSSVGSFALSETGSGSDAFALKTTAKKDGDDYVINGSKMWISNSEQSETFLVFANADP 209

  Fly   206 EDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGHGYKYAAGFL 270
            ..||:|||.|||::.|.|..:.|.|||||:|:|.||.|.||||||.:..|||.||.|||||..:|
 Worm   210 SKGYKGITCFIVEKGTKGFTIGKHEDKLGVRSSSTCPLHFDNVRVHKSAILGEFGKGYKYAIEYL 274

  Fly   271 NEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARLMTYNAAR 335
            |.|||||.|||:|||||.||.|||||.:|:|||..|.:||.||||||.|.||||||||:.|||||
 Worm   275 NAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGQRIIDFQGMQHQIAQVRTEIEAARLLVYNAAR 339

  Fly   336 LQEQGVPFQKEAAMAKYYAS 355
            :::.|:||.:||||||.:||
 Worm   340 MKQHGLPFVREAAMAKLFAS 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 187/319 (59%)
SCAD_SBCAD 39..410 CDD:173847 186/317 (59%)
acdh-4NP_001300435.1 CaiA 41..359 CDD:224871 185/317 (58%)
ACAD 43..359 CDD:299127 184/315 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 135 1.000 Domainoid score I3086
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1951
OMA 1 1.010 - - QHG53594
OrthoDB 1 1.010 - - D331445at33208
OrthoFinder 1 1.000 - - FOG0000508
OrthoInspector 1 1.000 - - otm14107
orthoMCL 1 0.900 - - OOG6_102170
Panther 1 1.100 - - O PTHR43884
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3530
SonicParanoid 1 1.000 - - X2781
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.770

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