DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and acdh-3

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001370606.1 Gene:acdh-3 / 172351 WormBaseID:WBGene00019433 Length:419 Species:Caenorhabditis elegans


Alignment Length:417 Identity:230/417 - (55%)
Similarity:300/417 - (71%) Gaps:8/417 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MNSLKKLPVRMLANAARQQSAAMSSAT------GLPPPLTFLTDDEKMMKETVAKLAQEQIQPLV 60
            |:||.:  ..:::.:|....|.||:..      .:|.||..|:::|..:..||.:.|...|:|||
 Worm     1 MSSLSR--SLLISRSAAPVVATMSTKPRAHIDGHVPSPLQQLSEEESSIVGTVRRFAVNVIKPLV 63

  Fly    61 KKMDFEHKFDPSVVKAVFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNTL 125
            ::||.:.:...||:...||||||||||..:.||.|.:|...::|:|||:|:||:|:.|||:.|||
 Worm    64 REMDDKSQMHQSVITGTFENGLMGIEIPEKYGGPGSSFFDAVLVIEELAKVDPSVSVFVDVQNTL 128

  Fly   126 VNSLMIKFGNAEQKAKYLPKLAQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISN 190
            |..|:|:.|..|||.|||||:..|..|||||:|.|:|||||:|||.|||||..:||:||||||:|
 Worm   129 VAPLIIQLGTEEQKQKYLPKIVTEAIGSFALSETGSGSDAFALKTTAKKDGDDFVISGSKMWITN 193

  Fly   191 SDVAGVFLIFANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENI 255
            :..|..||:||||....||:|||.|:|||...|:.|.|.|||||||||.||.:.||||||.:.:|
 Worm   194 AGHAQFFLVFANADSAKGYKGITCFLVDRNQEGVSVGKKEDKLGIRASSTCSVHFDNVRVHKSSI 258

  Fly   256 LGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVA 320
            ||.:|.|||||...||.|||||.|||:|||||.||.|||||.:|:|||..:.:||.|||||....
 Worm   259 LGEYGKGYKYAIECLNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGQRLIDFQGMQHQIGQTR 323

  Fly   321 TEIEAARLMTYNAARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYR 385
            .|||||||:.|||||:::.|:||.:||||||.:||:||..|..|||:|:||||||::||.||:||
 Worm   324 MEIEAARLLVYNAARMKQNGLPFVREAAMAKLFASQVATTATSKCVEWLGGVGFTKEFPVEKFYR 388

  Fly   386 DVKIGAIYEGTTNMQLSTIAKCIKKDY 412
            |.|||.|||||:|:||:||||.:..:|
 Worm   389 DSKIGTIYEGTSNIQLNTIAKLVDIEY 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 220/376 (59%)
SCAD_SBCAD 39..410 CDD:173847 218/370 (59%)
acdh-3NP_001370606.1 SCAD_SBCAD 42..412 CDD:173847 218/369 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 204 1.000 Domainoid score I1720
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1216
Inparanoid 1 1.050 465 1.000 Inparanoid score I856
Isobase 1 0.950 - 0 Normalized mean entropy S1951
OMA 1 1.010 - - QHG53594
OrthoDB 1 1.010 - - D331445at33208
OrthoFinder 1 1.000 - - FOG0000508
OrthoInspector 1 1.000 - - otm14107
orthoMCL 1 0.900 - - OOG6_102170
Panther 1 1.100 - - LDO PTHR43884
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3530
SonicParanoid 1 1.000 - - X2781
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.860

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