DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3902 and Acox1

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001258827.1 Gene:Acox1 / 11430 MGIID:1330812 Length:661 Species:Mus musculus


Alignment Length:468 Identity:103/468 - (22%)
Similarity:164/468 - (35%) Gaps:107/468 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RQQSAAMSSATGLPPPLTFLTDDEKMMKETVAKLAQEQIQPLV-KKMDFEH-------------- 67
            |::.||   ||..|..:|.:.|..   .|...:  :.:|:.|: ...||:|              
Mouse     6 RKERAA---ATFNPELITHILDGS---PENTRR--RREIENLILNDPDFQHEDYNFLTRSQRYEV 62

  Fly    68 --KFDPSVVKAVFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNTLVNSLM 130
              |...::||.:.|.|:...|   |:.......|.|.|        :|....:.....||:|.  
Mouse    63 AVKKSATMVKKMREFGIADPE---EIMWFKKLHMVNFV--------EPVGLNYSMFIPTLLNQ-- 114

  Fly   131 IKFGNAEQKAKYL-PKLAQEYAGSFALTEPGAGSDAFSLKTVAKKD--GSHYVINGS-----KMW 187
               |...|:.|:: |....:..|::|.||.|.|:....|:|.|..|  ...:::|..     |.|
Mouse   115 ---GTTAQQEKWMHPSQELQIIGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWW 176

  Fly   188 ------ISNSDVAGVFLIFANAKPEDGYRGITTFIV-------DRETPGLIVNKPEDKLGIRASG 239
                  .||..:     :.|.........|:..|:|       .:..||:.|.....|.|.....
Mouse   177 PGGLGKTSNHAI-----VLAQLITRGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMD 236

  Fly   240 TCQLTFDNVRVPEENIL---------GTFGH--GYKYAAG---FLNEGRIGIAAQMVGLAQGTFD 290
            ...|..||.|:|.||:|         ||:..  ..|...|   |:....:|.|||.:..|   ..
Mouse   237 NGYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGSAAQSLSKA---CT 298

  Fly   291 ATIPYLLERKQF-------GDAIYNFQSMQHQIATVATEIEAARLM------TYNAARLQE---Q 339
            ..|.|...|:|.       ...|.:||:.|:::..:.....|...:      ||  .|:.|   |
Mouse   299 IAIRYSAVRRQSEIKRSEPEPQILDFQTQQYKLFPLLATAYAFHFLGRYIKETY--MRINESIGQ 361

  Fly   340 G----VP-FQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNM 399
            |    :| .....|..|.:.:..|.....:|....||.|::........|........:||...:
Mouse   362 GDLSELPELHALTAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPNIYVTFTPACTFEGENTV 426

  Fly   400 QLSTIAKCIKKDY 412
            .:...|:.:.|.|
Mouse   427 MMLQTARFLMKIY 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 96/449 (21%)
SCAD_SBCAD 39..410 CDD:173847 94/443 (21%)
Acox1NP_001258827.1 AXO 3..638 CDD:173839 103/468 (22%)
Microbody targeting signal 659..661
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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