DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3902 and acadsb

DIOPT Version :9

Sequence 1:NP_649069.2 Gene:CG3902 / 40059 FlyBaseID:FBgn0036824 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001338578.1 Gene:acadsb / 110437777 ZFINID:ZDB-GENE-070410-109 Length:422 Species:Danio rerio


Alignment Length:409 Identity:241/409 - (58%)
Similarity:308/409 - (75%) Gaps:0/409 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SLKKLPVRMLANAARQQSAAMSSATGLPPPLTFLTDDEKMMKETVAKLAQEQIQPLVKKMDFEHK 68
            |..:..||:|.:.|...............||...:::|.||:|||.:.|||.:.|||.|||.|..
Zfish    12 SRARAAVRLLCSRAAATETLQDGNRNSFQPLQSFSEEESMMRETVRRFAQECVSPLVSKMDEESV 76

  Fly    69 FDPSVVKAVFENGLMGIEIDTELGGSGCNFMTNIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKF 133
            .|..|::|:||.||||:||.:|.|||||:|.::::|:|||:|:|.:||...||.|||:|:||::.
Zfish    77 MDAGVIRALFEQGLMGMEIGSEYGGSGCSFFSSVLVIEELAKVDASVAVLCDIQNTLINTLMMQL 141

  Fly   134 GNAEQKAKYLPKLAQEYAGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSDVAGVFL 198
            |...||.||||:||.:..|||.|:|..||||||||:|.|:|...:::||||||||||::.|||||
Zfish   142 GTHTQKEKYLPRLASDMVGSFCLSEAEAGSDAFSLRTQAQKHKDYFIINGSKMWISNAEHAGVFL 206

  Fly   199 IFANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRVPEENILGTFGHGY 263
            :.|||:|..||||||.|||||:|.||.:.:.|:|||:|||.||.|||||::||||.:||..|.||
Zfish   207 VMANAEPAAGYRGITCFIVDRDTEGLHIGRKENKLGLRASSTCPLTFDNMKVPEECVLGKVGQGY 271

  Fly   264 KYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERKQFGDAIYNFQSMQHQIATVATEIEAARL 328
            |||.|.||.|||||||||:|||||.||.|:||..:|.|||..|::||.||||||.|||::|||||
Zfish   272 KYAIGMLNGGRIGIAAQMLGLAQGCFDQTVPYTRQRVQFGKRIFDFQGMQHQIAHVATQLEAARL 336

  Fly   329 MTYNAARLQEQGVPFQKEAAMAKYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIY 393
            :|||||||:|.|.|:.|||.|||||::|||.....||::||||||||:|:|.||||||.|||.||
Zfish   337 LTYNAARLKEAGRPYIKEACMAKYYSAEVASLTTSKCLEWMGGVGFTKDYPIEKYYRDCKIGTIY 401

  Fly   394 EGTTNMQLSTIAKCIKKDY 412
            |||||:||||:||.|.::|
Zfish   402 EGTTNIQLSTMAKMIDQEY 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3902NP_649069.2 CaiA 37..414 CDD:224871 234/376 (62%)
SCAD_SBCAD 39..410 CDD:173847 233/370 (63%)
acadsbNP_001338578.1 SCAD_SBCAD 47..417 CDD:173847 232/369 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583568
Domainoid 1 1.000 218 1.000 Domainoid score I2605
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 494 1.000 Inparanoid score I1358
OMA 1 1.010 - - QHG53594
OrthoDB 1 1.010 - - D331445at33208
OrthoFinder 1 1.000 - - FOG0000508
OrthoInspector 1 1.000 - - oto40035
orthoMCL 1 0.900 - - OOG6_102170
Panther 1 1.100 - - LDO PTHR43884
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3530
SonicParanoid 1 1.000 - - X2781
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

Return to query results.
Submit another query.