DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3961 and aas

DIOPT Version :10

Sequence 1:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_417313.1 Gene:aas / 947315 ECOCYCID:EG11679 Length:719 Species:Escherichia coli


Alignment Length:698 Identity:158/698 - (22%)
Similarity:256/698 - (36%) Gaps:178/698 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 TLGSL------AASVAYYFATRPVPERPLVPLENQSPLLEGPEQIHVSKFYKESKN--------- 90
            |.|||      |..||.......:|.|           :||.|..|.|:.....|.         
E. coli   110 TTGSLMKIYDGAGFVAAKSGATVIPVR-----------IEGAELTHFSRLKGLVKRRLFPQITLH 163

  Fly    91 ----------------------GKFVSYITENVR-------TLYQTFREGAYASNNG-PCL---- 121
                                  |:.:..|....|       |||::.....|....| .|:    
E. coli   164 ILPPTQVAMPDAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVN 228

  Fly   122 ----GWRETLTSP-YQWINYDEALLRAKNFGAGMLALGARPKQLIGIYSQNR-PEWILYEQGCYS 180
                .:|:.||.. :.....::..:..:..|..:...|.....:.|..::.| |..:.|..|...
E. coli   229 FTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRMPAMMNYTAGVKG 293

  Fly   181 FSLVVVPLYDTLGPDACAFIIRQTDMQVVIVEDDGKAAMLLEKAPRSLKIIVAIKPIRQTTLERA 245
            .:..:     |.......|..||       ..|.||...|.|:..:...:.:.......||.:: 
E. coli   294 LTSAI-----TAAEIKTIFTSRQ-------FLDKGKLWHLPEQLTQVRWVYLEDLKADVTTADK- 345

  Fly   246 RSRGIQIFSFIDVEKLGAKGNHPEVPPTAEDLCTVCYTSGTTGNPKGVMLTHGNVVAGVCSVILQ 310
                :.||:.:.:.:|.      :|....|:...:.:|||:.|:||||:.:|.:::|.| ..|..
E. coli   346 ----VWIFAHLLMPRLA------QVKQQPEEEALILFTSGSEGHPKGVVHSHKSILANV-EQIKT 399

  Fly   311 MGDHRIRAGDVMVSFLPLAHMFERCCENGMYYVGGCVGFYSGDIKELTNDLKMLKPTVM--PAVP 373
            :.|  ....|..:|.|||.|.|           |..||.::   ..||.....|.|:.:  ..||
E. coli   400 IAD--FTTNDRFMSALPLFHSF-----------GLTVGLFT---PLLTGAEVFLYPSPLHYRIVP 448

  Fly   374 RLLNRVYDKIQNDISAS---GLKRGLFNMAMRAKEKEIARGVLRRNGCWDKLVFKKVHQAFGGNL 435
            .|   |||:     |.:   |....|.:.|..|...:..|                        |
E. coli   449 EL---VYDR-----SCTVLFGTSTFLGHYARFANPYDFYR------------------------L 481

  Fly   436 RLMVVGSAPLAGNVLTFMRCALGCLVLEGYGQTECTGAITLTVQGDHVPNHVGPPVSCNAVKLVD 500
            |.:|.|:..|..:.....:...|..:|||||.|||...:::.|.....|..||..:.....:|:.
E. coli   482 RYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLS 546

  Fly   501 VPEMEYFANQNTGEVCVRGSNVFHGYYKDPEK-------TAEAIDSE---GWHHTGDVGMWLPNG 555
            ||.:|     ..|.:.::|.|:.:||.: .||       |||.:..|   ||:.|||:..:...|
E. coli   547 VPGIE-----EGGRLQLKGPNIMNGYLR-VEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQG 605

  Fly   556 TLRIIDRRKHIFKLSQGEYIVPEKIENIYTLSQYVNQVYVYGESLKSCII---AVVVPDT----- 612
            .::|..|.|...|:: ||.:..|.:|.   |:..|:...|:..::||...   |:|:..|     
E. coli   606 FVQIQGRAKRFAKIA-GEMVSLEMVEQ---LALGVSPDKVHATAIKSDASKGEALVLFTTDNELT 666

  Fly   613 -DVLKQWATENNVRGTLSVLCNNKNVKELIMNDMLNWGKQS--GLKSF 657
             |.|:|:|.|:.|    ..|...::::.|....:|..||..  .|||:
E. coli   667 RDKLQQYAREHGV----PELAVPRDIRYLKQMPLLGSGKPDFVTLKSW 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 131/556 (24%)
aasNP_417313.1 PRK08043 1..718 CDD:181207 158/698 (23%)

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