DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3961 and FAA3

DIOPT Version :9

Sequence 1:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_012257.1 Gene:FAA3 / 854808 SGDID:S000001271 Length:694 Species:Saccharomyces cerevisiae


Alignment Length:693 Identity:211/693 - (30%)
Similarity:343/693 - (49%) Gaps:76/693 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VPERPLV-PLENQSPLLEGPEQIHVSKFYKE--SKNGKFVSYITENVRTLYQTFR------EGAY 113
            |.:|||: ||.:.:..|        .:|..|  :|.||.......:|..:::|.:      :|..
Yeast    26 VKKRPLIRPLNSSASTL--------YEFALECFNKGGKRDGMAWRDVIEIHETKKTIVRKVDGKD 82

  Fly   114 ASNNGPCLGWRETLTSPYQWINYDEALLRAKNFGAGMLALGARP--KQLIGIYSQNRPEWILYEQ 176
            .|....   |.....|||:.:.|.|.:....:.|.|:..:|.:|  :....|::....:|:....
Yeast    83 KSIEKT---WLYYEMSPYKMMTYQELIWVMHDMGRGLAKIGIKPNGEHKFHIFASTSHKWMKIFL 144

  Fly   177 GCYSFSLVVVPLYDTLGPDACAFIIRQTDMQVVIVEDDGKAAMLLE-KAPRSLKIIVAIKPI--- 237
            ||.|..:.||..|||||.......:.:|:...:..::...|.|::. ::.:.:|.::..:||   
Yeast   145 GCISQGIPVVTAYDTLGESGLIHSMVETESAAIFTDNQLLAKMIVPLQSAKDIKFLIHNEPIDPN 209

  Fly   238 --RQT---------TLERARS--RGIQIFSFIDVEKLGAKGNHPEV---PPTAEDLCTVCYTSGT 286
              ||.         .:.:.|.  ..|:|:||.:|.|:|.| :..||   ||..:||..:.||||:
Yeast   210 DRRQNGKLYKAAKDAINKIREVRPDIKIYSFEEVVKIGKK-SKDEVKLHPPEPKDLACIMYTSGS 273

  Fly   287 TGNPKGVMLTHGNVVAGVCSVILQMGDHR----IRAGDVMVSFLPLAHMFERCCENGMYYVGGCV 347
            ...||||:|||.|:|:|:..|     .|.    |.:.|.::|||||||:||...|...:|..|.:
Yeast   274 ISAPKGVVLTHYNIVSGIAGV-----GHNVFGWIGSTDRVLSFLPLAHIFELVFEFEAFYWNGIL 333

  Fly   348 GFYSGDIKELTN--------DLKMLKPTVMPAVPRLLNRVYDKIQNDIS-ASGLKRGLFNMAMRA 403
            |:  |.:|.|||        ||...|||:|..|..:...|...|...|| .:.:.:.:|..|...
Yeast   334 GY--GSVKTLTNTSTRNCKGDLVEFKPTIMIGVAAVWETVRKAILEKISDLTPVLQKIFWSAYSM 396

  Fly   404 KEKEI-ARGVLRRNGCWDKLVFKKVHQAFGGNLRLMVVGSAPLAGNVLTFMRCALGCLVLEGYGQ 467
            |||.: ..|.|.|      :|||||.||.||:|:.::.|.:.::.:...|....| |.::.|||.
Yeast   397 KEKSVPCTGFLSR------MVFKKVRQATGGHLKYIMNGGSAISIDAQKFFSIVL-CPMIIGYGL 454

  Fly   468 TECTGAITLTVQGDHVP-NHVGPPVSCNAVKLVDVPEMEYFANQNTGEVCVRGSNVFHGYYKDPE 531
            || |.|....::.||.. ..||..|.....|||||.::.|:|..|.||:.::|:.|...|||:|.
Yeast   455 TE-TVANACVLEPDHFEYGIVGDLVGSVTAKLVDVKDLGYYAKNNQGELLLKGAPVCSEYYKNPI 518

  Fly   532 KTAEAIDSEGWHHTGDVGMWLPNGTLRIIDRRKHIFKLSQGEYIVPEKIENIYTLSQYVNQVYVY 596
            :||.:...:||..|||:..|.|.|.|:||||||::.|...||||..||:|::|..:.||..:.||
Yeast   519 ETAVSFTYDGWFRTGDIVEWTPKGQLKIIDRRKNLVKTLNGEYIALEKLESVYRSNSYVKNICVY 583

  Fly   597 GESLKSCIIAVVVPDTDVLKQWATENNV--RG-TLSVLCNNKNVKELIMNDMLNWGKQSGLKSFE 658
            .:..:...:.:|||:...|.::|.:..:  :| .:....::|.::..:..:|:...|..||...|
Yeast   584 ADESRVKPVGIVVPNPGPLSKFAVKLRIMKKGEDIENYIHDKALRNAVFKEMIATAKSQGLVGIE 648

  Fly   659 QVKDIYLHPDPFSVQNGLLTPTFKAKRPQLKSYFKPQLEDMYK 701
            .:..|....:.::.:||.:|...|.||.::.:..|.::|.:||
Yeast   649 LLCGIVFFDEEWTPENGFVTSAQKLKRREILAAVKSEVERVYK 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 191/610 (31%)
FAA3NP_012257.1 LC_FACS_euk1 95..678 CDD:341294 190/598 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1301
OMA 1 1.010 - - QHG53493
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.770

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