DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3961 and LACS9

DIOPT Version :9

Sequence 1:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_177882.1 Gene:LACS9 / 844094 AraportID:AT1G77590 Length:691 Species:Arabidopsis thaliana


Alignment Length:689 Identity:213/689 - (30%)
Similarity:347/689 - (50%) Gaps:85/689 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 VSKFYKESKNG----------------KF---VSYITENVRTLYQTFREGAYASNNGPCLGWRET 126
            |.|..||.|.|                :|   ||...|::.||.:.|.....|.::...||.|:.
plant    18 VQKSKKEKKRGVVVDVGGEPGYAIRNHRFTEPVSSHWEHISTLPELFEISCNAHSDRVFLGTRKL 82

  Fly   127 LT-----------------SPYQWINYDEALLRAKNFGAGMLALGARPKQLIGIYSQNRPEWILY 174
            ::                 ..|:|:.:.:.|....:|.:|::.:|.:.::.:.|::..|.||.:.
plant    83 ISREIETSEDGKTFEKLHLGDYEWLTFGKTLEAVCDFASGLVQIGHKTEERVAIFADTREEWFIS 147

  Fly   175 EQGCYSFSLVVVPLYDTLGPDACAFIIRQTDMQVVIV-EDDGKAAMLLEKAPRSLKIIVAIKPIR 238
            .|||:..::.||.:|.:||.:|....:.:|::..||. ..:.|..|.:.:...::|.::.:....
plant   148 LQGCFRRNVTVVTIYSSLGEEALCHSLNETEVTTVICGSKELKKLMDISQQLETVKRVICMDDEF 212

  Fly   239 QTTLERARSRGIQIFSFIDVEKLGAKGNHPEVP--PTAEDLCTVCYTSGTTGNPKGVMLTHGNVV 301
            .:.:    :......||.||:|||.:  :|..|  |.:.|:..:.||||:||.|||||:|||||:
plant   213 PSDV----NSNWMATSFTDVQKLGRE--NPVDPNFPLSADVAVIMYTSGSTGLPKGVMMTHGNVL 271

  Fly   302 AGVCSVILQMGDHRIRAGDVMVSFLPLAHMFERCCENGMYYVGGCVGF--------YSGDIKELT 358
            |.|.:|:..:.|  :...|:.:::|||||:.|...|:.|..:|..:|:        .|..||:.|
plant   272 ATVSAVMTIVPD--LGKRDIYMAYLPLAHILELAAESVMATIGSAIGYGSPLTLTDTSNKIKKGT 334

  Fly   359 -NDLKMLKPTVMPAVPRLLNRVYDKIQNDISA-SGLKRGLFNMAMRAKEKEIARGVLRRNG---- 417
             .|:..||||:|.|||.:|:||.|.::..:.| .||.:.||:.|       .||.:...||    
plant   335 KGDVTALKPTIMTAVPAILDRVRDGVRKKVDAKGGLSKKLFDFA-------YARRLSAINGSWFG 392

  Fly   418 -------CWDKLVFKKVHQAFGGNLRLMVVGSAPLAGNVLTFMRCALGCLVLEGYGQTE-CTGAI 474
                   .||.|||:|:....||.:|.::.|.|||:|:...|:...:|..:.:|||.|| |.|. 
plant   393 AWGLEKLLWDVLVFRKIRAVLGGQIRYLLSGGAPLSGDTQRFINICVGAPIGQGYGLTETCAGG- 456

  Fly   475 TLTVQGDHVPNHVGPPVSCNAVKLVDVPEMEYFANQN---TGEVCVRGSNVFHGYYKDPEKTAEA 536
            |.:...|.....||.|:.|:.|||||..|..|..:..   .||:.:.|||:..||:|:.|||.|.
plant   457 TFSEFEDTSVGRVGAPLPCSFVKLVDWAEGGYLTSDKPMPRGEIVIGGSNITLGYFKNEEKTKEV 521

  Fly   537 --IDSEG--WHHTGDVGMWLPNGTLRIIDRRKHIFKLSQGEYIVPEKIENIYTLSQYVNQVYVYG 597
              :|.:|  |.:|||:|.:.|:|.|.||||:|.|.||..|||:...|:|...::|.||..:.|:.
plant   522 YKVDEKGMRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSISPYVENIMVHA 586

  Fly   598 ESLKSCIIAVVVPDTDVLKQWATENNVR-GTLSVLCNNKNVKELIMNDMLNWGKQSGLKSFEQVK 661
            :|..|..:|:||.....::.||::..:. .....||..:...:.:...::...|||.|:.||...
plant   587 DSFYSYCVALVVASQHTVEGWASKQGIDFANFEELCTKEQAVKEVYASLVKAAKQSRLEKFEIPA 651

  Fly   662 DIYLHPDPFSVQNGLLTPTFKAKRPQLKSYFKPQLEDMY 700
            .|.|...|::.::||:|...|.||..::..|...|..:|
plant   652 KIKLLASPWTPESGLVTAALKLKRDVIRREFSEDLTKLY 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 196/604 (32%)
LACS9NP_177882.1 PLN02387 1..691 CDD:215217 213/689 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53493
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.