DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3961 and LACS2

DIOPT Version :9

Sequence 1:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_175368.2 Gene:LACS2 / 841367 AraportID:AT1G49430 Length:665 Species:Arabidopsis thaliana


Alignment Length:634 Identity:232/634 - (36%)
Similarity:363/634 - (57%) Gaps:26/634 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 KESKNGKFVSYITENVRTLYQTFREGAYASNNGPCLGWRETLTS---PYQWINYDEALLRAKNFG 147
            |.:|:|  :..:..::.:.:|.|.|......|...||.|.|..|   ||.||.|.||...|...|
plant    31 KYAKDG--LLDLPTDIDSPWQFFSEAVKKYPNEQMLGQRVTTDSKVGPYTWITYKEAHDAAIRIG 93

  Fly   148 AGMLALGARPKQLIGIYSQNRPEWILYEQGCYSFSLVVVPLYDTLGPDACAFIIRQTDMQVVIVE 212
            :.:.:.|..|....|||..|.||||:..:.|.|..:..|||||:||.:|..|||...::.:|.|:
plant    94 SAIRSRGVDPGHCCGIYGANCPEWIIAMEACMSQGITYVPLYDSLGVNAVEFIINHAEVSLVFVQ 158

  Fly   213 DDGKAAML-LEKAPRS-LKIIVAIKPIRQTTLERARSRGIQIFSFIDVEKLG--AKGNHPEVPPT 273
            :...:::| .:|...| ||.||:...:..|..|.|:::.:.:||:.:...:|  .:.|.|....|
plant   159 EKTVSSILSCQKGCSSNLKTIVSFGEVSSTQKEEAKNQCVSLFSWNEFSLMGNLDEANLPRKRKT 223

  Fly   274 AEDLCTVCYTSGTTGNPKGVMLTHGNVVAGVCSV--ILQMGDHRIRAGDVMVSFLPLAHMFERCC 336
              |:||:.|||||||.||||:|.:..:...|.|:  :|::.|......||..|:|||||.:::..
plant   224 --DICTIMYTSGTTGEPKGVILNNAAISVQVLSIDKMLEVTDRSCDTSDVFFSYLPLAHCYDQVM 286

  Fly   337 ENGMYYV--GGCVGFYSGDIKELTNDLKMLKPTVMPAVPRLLNRVYDKIQNDISASGL-KRGLFN 398
            |  :|::  |..||::.|||:.|.:|::.|||||...|||:.:::|..|...|||||| ::.||:
plant   287 E--IYFLSRGSSVGYWRGDIRYLMDDVQALKPTVFCGVPRVYDKLYAGIMQKISASGLIRKKLFD 349

  Fly   399 MAMRAKEKEIARGVLRRNGC--WDKLVFKKVHQAFGGNLRLMVVGSAPLAGNVLTFMRCALGCLV 461
            .|...|...:.:|..:....  .|:|:|.|:.:|.||...:::.|:|||..:|..|:|......:
plant   350 FAYNYKLGNMRKGFSQEEASPRLDRLMFDKIKEALGGRAHMLLSGAAPLPRHVEEFLRIIPASNL 414

  Fly   462 LEGYGQTE-CTGAITLTVQGDHVPNHVGPPVSCNAVKLVDVPEMEY---FANQNTGEVCVRGSNV 522
            .:|||.|| |.|:.|.......:...||.|:.....:||.||||.|   .|:...||:|:||:::
plant   415 SQGYGLTESCGGSFTTLAGVFSMVGTVGVPMPTVEARLVSVPEMGYDAFSADVPRGEICLRGNSM 479

  Fly   523 FHGYYKDPEKTAEAIDSEGWHHTGDVGMWLPNGTLRIIDRRKHIFKLSQGEYIVPEKIENIYTLS 587
            |.||:|..:.|.:.: .:||.||||:|.|..:|:::||||:|:|||||||||:..|.:||.|:..
plant   480 FSGYHKRQDLTDQVL-IDGWFHTGDIGEWQEDGSMKIIDRKKNIFKLSQGEYVAVENLENTYSRC 543

  Fly   588 QYVNQVYVYGESLKSCIIAVVVPDTDVLKQWATEN-NVRGTLSVLCNNKNVKELIMNDMLNWGKQ 651
            ..:.|::|||.|.:|.::.|||||...::.||..| ........||.|...::..::::.:..||
plant   544 PLIAQIWVYGNSFESFLVGVVVPDRKAIEDWAKLNYQSPNDFESLCQNLKAQKYFLDELNSTAKQ 608

  Fly   652 SGLKSFEQVKDIYLHPDPFSVQNGLLTPTFKAKRPQLKSYFKPQLEDMY 700
            ..||.||.:|.|:|.|:||.::..|:|||||.|||||..::|..::.:|
plant   609 YQLKGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLQHYKGIVDQLY 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 220/587 (37%)
LACS2NP_175368.2 PLN02861 3..665 CDD:178452 232/634 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 81 1.000 Domainoid score I2942
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53493
OrthoDB 1 1.010 - - D630541at2759
OrthoFinder 1 1.000 - - FOG0000532
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100152
Panther 1 1.100 - - O PTHR43272
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X329
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.790

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