DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3961 and LACS4

DIOPT Version :9

Sequence 1:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_194116.1 Gene:LACS4 / 828484 AraportID:AT4G23850 Length:666 Species:Arabidopsis thaliana


Alignment Length:621 Identity:253/621 - (40%)
Similarity:371/621 - (59%) Gaps:18/621 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 ENVRTLYQTFREGAYASNNGPCLGWRETL---TSPYQWINYDEALLRAKNFGAGMLALGARPKQL 160
            |.:.:.:..||.......|.|.||.||.:   ...|.|..|.|........|..:.::|.:.:..
plant    42 EGMDSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVMKLGNSLRSVGVKDEAK 106

  Fly   161 IGIYSQNRPEWILYEQGCYSFSLVVVPLYDTLGPDACAFIIRQTDMQVVIVEDDGKAAMLLEKAP 225
            .|||..|.||||:..:.|.:..|..||||||||.||..|||..:::.:|.||:. |.:.|.:..|
plant   107 CGIYGANSPEWIISMEACNAHGLYCVPLYDTLGADAVEFIISHSEVSIVFVEEK-KISELFKTCP 170

  Fly   226 RS---LKIIVAIKPIRQTTLERARSRGIQIFSFIDVEKLGAKGNHPEVP-PTAEDLCTVCYTSGT 286
            .|   :|.:|:...:.:...|.|.:.|:.|:::.:..||| :|...::| ....|:||:.|||||
plant   171 NSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWDEFLKLG-EGKQYDLPIKKKSDICTIMYTSGT 234

  Fly   287 TGNPKGVMLTHGNVVAGVCSVI--LQMGDHRIRAGDVMVSFLPLAHMFERCCENGMYYVGGCVGF 349
            ||:|||||:::.::|..:..||  |:..:..:...||.:|:|||||:|:|..|......|..:||
plant   235 TGDPKGVMISNESIVTLIAGVIRLLKSANEALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGF 299

  Fly   350 YSGDIKELTNDLKMLKPTVMPAVPRLLNRVYDKIQNDISASG-LKRGLFNMAMRAKEKEIARGV- 412
            :.||:|.|..||..||||:..||||:|:|||..:|..:|..| ||:.:|:.|...|...:.:|. 
plant   300 WRGDVKLLIEDLAELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFIFDSAFSYKFGYMKKGQS 364

  Fly   413 -LRRNGCWDKLVFKKVHQAFGGNLRLMVVGSAPLAGNVLTFMRCALGCLVLEGYGQTE-CTGAIT 475
             :..:..:|||||.||.|..|||:|:::.|:||||.:|.:|:|....|.||:|||.|| |.|...
plant   365 HVEASPLFDKLVFSKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCAGTFV 429

  Fly   476 LTVQGDHVPNHVGPPVSCNAVKLVDVPEMEYFANQNT--GEVCVRGSNVFHGYYKDPEKTAEAID 538
            .......:...|||||....::|..||||||.|..:|  ||:|:||..:|.||||..:.|.|.: 
plant   430 SLPDELGMLGTVGPPVPNVDIRLESVPEMEYDALASTARGEICIRGKTLFSGYYKREDLTKEVL- 493

  Fly   539 SEGWHHTGDVGMWLPNGTLRIIDRRKHIFKLSQGEYIVPEKIENIYTLSQYVNQVYVYGESLKSC 603
            .:||.||||||.|.|:|:::||||:|:|||||||||:..|.|||||...|.|:.|:|||.|.:|.
plant   494 IDGWLHTGDVGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFESF 558

  Fly   604 IIAVVVPDTDVLKQWATENNVRGTLSVLCNNKNVKELIMNDMLNWGKQSGLKSFEQVKDIYLHPD 668
            :||:..|:..:|::||.||.|.|....||.|:..||.|:.:::...|:..:|.||.:|.|:|.|.
plant   559 LIAIANPNQHILERWAAENGVSGDYDALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPV 623

  Fly   669 PFSVQNGLLTPTFKAKRPQLKSYFKPQLEDMYKHLD 704
            ||.::..|||||||.|||||..|::..:::|||.::
plant   624 PFDMERDLLTPTFKKKRPQLLKYYQSVIDEMYKTIN 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 242/582 (42%)
LACS4NP_194116.1 PLN02614 1..666 CDD:166255 253/621 (41%)
LC-FACS_euk 75..655 CDD:213293 241/582 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 81 1.000 Domainoid score I2942
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53493
OrthoDB 1 1.010 - - D630541at2759
OrthoFinder 1 1.000 - - FOG0000532
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100152
Panther 1 1.100 - - O PTHR43272
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X329
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.790

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