DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3961 and LACS1

DIOPT Version :9

Sequence 1:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_001031554.1 Gene:LACS1 / 819337 AraportID:AT2G47240 Length:660 Species:Arabidopsis thaliana


Alignment Length:639 Identity:226/639 - (35%)
Similarity:353/639 - (55%) Gaps:20/639 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 VSKFYKESKNGKFVSYITENVRTLYQTFREGA--YASNNGPCLGWRETL---TSPYQWINYDEAL 140
            |...|:...:.|....|...:.|.:..|.:..  :..||  .||||..:   ..||.|..|.|..
plant    21 VGPVYRNLLSEKGFPPIDSEITTAWDIFSKSVEKFPDNN--MLGWRRIVDEKVGPYMWKTYKEVY 83

  Fly   141 LRAKNFGAGMLALGARPKQLIGIYSQNRPEWILYEQGCYSFSLVVVPLYDTLGPDACAFIIRQTD 205
            ......|:.:.|.||.|...:|||..|.|:||:..:.|.:.:|:.||||||||..|..:|:...:
plant    84 EEVLQIGSALRAAGAEPGSRVGIYGVNCPQWIIAMEACAAHTLICVPLYDTLGSGAVDYIVEHAE 148

  Fly   206 MQVVIVEDDGKAAMLLE---KAPRSLKIIVAIKPIRQTTLERARSRGIQIFSFIDVEKLGAKGNH 267
            :..|.|:|. |...|||   |..:.||.||:...:......:|...|::.:|:||...:|.:...
plant   149 IDFVFVQDT-KIKGLLEPDCKCAKRLKAIVSFTNVSDELSHKASEIGVKTYSWIDFLHMGREKPE 212

  Fly   268 PEVPPTAEDLCTVCYTSGTTGNPKGVMLTHGNVVAGVCSVILQMG--DHRIRAGDVMVSFLPLAH 330
            ...||.|.::||:.|||||:|:||||:|||..|...|..:.|.|.  :.::...||.:|||||||
plant   213 DTNPPKAFNICTIMYTSGTSGDPKGVVLTHQAVATFVVGMDLYMDQFEDKMTHDDVYLSFLPLAH 277

  Fly   331 MFERCCENGMYYVGGCVGFYSGDIKELTNDLKMLKPTVMPAVPRLLNRVYDKIQNDI-SASGLKR 394
            :.:|..|...:..|..||:|.|::..|.:|::.||||.:..|||:..|:::.||..: ..:..:|
plant   278 ILDRMNEEYFFRKGASVGYYHGNLNVLRDDIQELKPTYLAGVPRVFERIHEGIQKALQELNPRRR 342

  Fly   395 GLFNMAMRAKEKEIARGV--LRRNGCWDKLVFKKVHQAFGGNLRLMVVGSAPLAGNVLTFMRCAL 457
            .:||...:.|...:.||.  .:.:...|.:.|:|:....||.:||:|.|.|||:..:..|:|...
plant   343 FIFNALYKHKLAWLNRGYSHSKASPMADFIAFRKIRDKLGGRIRLLVSGGAPLSPEIEEFLRVTC 407

  Fly   458 GCLVLEGYGQTECTGAITLTVQGDH-VPNHVGPPVSCNAVKLVDVPEMEY--FANQNTGEVCVRG 519
            .|.|::|||.||..|...|....:. :...||.|...|.::|.:|.||.|  ......||:|:||
plant   408 CCFVVQGYGLTETLGGTALGFPDEMCMLGTVGIPAVYNEIRLEEVSEMGYDPLGENPAGEICIRG 472

  Fly   520 SNVFHGYYKDPEKTAEAIDSEGWHHTGDVGMWLPNGTLRIIDRRKHIFKLSQGEYIVPEKIENIY 584
            ..:|.||||:||.|.|.: .:||.||||:|..||||.|:||||:|::.|||||||:..|.:|||:
plant   473 QCMFSGYYKNPELTEEVM-KDGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEHLENIF 536

  Fly   585 TLSQYVNQVYVYGESLKSCIIAVVVPDTDVLKQWATENNVRGTLSVLCNNKNVKELIMNDMLNWG 649
            ..:..|..::|||:|.||.::|||||:.:.:.:||.:.........||:...:||.|::::.:..
plant   537 GQNSVVQDIWVYGDSFKSMLVAVVVPNPETVNRWAKDLGFTKPFEELCSFPELKEHIISELKSTA 601

  Fly   650 KQSGLKSFEQVKDIYLHPDPFSVQNGLLTPTFKAKRPQLKSYFKPQLEDMYKHL 703
            :::.|:.||.:|.:.:...||.|:..|:|.|.|.:|..|..|::.|:::||:.|
plant   602 EKNKLRKFEYIKAVTVETKPFDVERDLVTATLKNRRNNLLKYYQVQIDEMYRKL 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 212/581 (36%)
LACS1NP_001031554.1 PLN02430 1..660 CDD:178049 226/639 (35%)
LC-FACS_euk 72..652 CDD:213293 211/581 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 81 1.000 Domainoid score I2942
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53493
OrthoDB 1 1.010 - - D630541at2759
OrthoFinder 1 1.000 - - FOG0000532
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100152
Panther 1 1.100 - - O PTHR43272
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X329
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.790

Return to query results.
Submit another query.