DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3961 and CG18586

DIOPT Version :9

Sequence 1:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_647993.2 Gene:CG18586 / 38659 FlyBaseID:FBgn0035642 Length:545 Species:Drosophila melanogaster


Alignment Length:578 Identity:115/578 - (19%)
Similarity:205/578 - (35%) Gaps:137/578 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 LRAKNFGAGMLALGARPKQLIGIYSQNRPEWILYEQGCYSFSLVVVPLYDTLGPDACAFIIRQTD 205
            :.|....:.|..:|.....::|:..::..........|:.....:..|::.......|.:...|.
  Fly    72 MNAMRVASYMRNMGLGQTDIVGVMGRHTTHQSAVAYACFFNGTPLHALHNAYEEACIAKLFGITK 136

  Fly   206 MQVVIVEDDGKAAMLLEKAPRSLKIIVAIKPIRQTTLERARSRGIQIFSFIDVEKLGAKGNHPEV 270
            .:::..:.|.     .||...:.|.:       |.|:...|                   |||..
  Fly   137 PRLIFCDGDE-----YEKVKSATKDL-------QVTIVTMR-------------------NHPRG 170

  Fly   271 PPTAEDLCT---------------------VCYTSGTTGNPKGVMLTHGNVVAGVCSVILQMGDH 314
            ....:|:.|                     :..:|||:|.||.|.:::               .|
  Fly   171 SVRIQDVLTTPVMQNFQPLRLKDGIDHTLAILSSSGTSGFPKAVTISN---------------SH 220

  Fly   315 RIRAGDVMVSFLPLAHMFERCCENGMYYVGGCVGFYSGDIKELTNDLKMLKPTVMPA--VPRLLN 377
            :|     :|.::.:.:       :.:.|....:.:.||....:|:.:......:...  .|.|..
  Fly   221 KI-----IVDYMAINN-------SNIQYTSSTLDWCSGLSMAITSGVFSTTSIIADCDFDPGLFC 273

  Fly   378 RVYDKIQNDISASGLKRGLFNMAMRAKEKEIARGVLRRNGCWDKLVFKKVHQAFGGNLRLMVVGS 442
            |...|.:  ||...|......:.....|.|                     .|...:|..::.|.
  Fly   274 RAIGKYR--ISMVLLSSSYLAIFANCPEFE---------------------SADLSSLNYVIFGG 315

  Fly   443 APLAGNVLTFMRCALG--CLVLEGYGQTECTGAITLTVQGDHVPNHVGPPVSCNAVKLVDVPEME 505
            :..:..|...:|..|.  ||.. .||.||...|.::.:..|..||.||..:....:|::|  |..
  Fly   316 SSCSLEVQRKVRSRLSHDCLNF-CYGLTELNSAGSVNLNFDEKPNSVGRAIRGIKIKVID--EQG 377

  Fly   506 YFANQN-TGEVCVRGSNVFHGYYKDPEKTAEAIDSEGWHHTGDVGMWLPNGTLRIIDRRKHIFKL 569
            .....| .||:|...|..:.||||:|::|.:..|||.|.||||:|....:|.|.:|||.|.:.|.
  Fly   378 EAQEPNVVGEICFHNSQKWAGYYKNPDETRQIQDSENWIHTGDLGYVDKDGYLFVIDRLKDMLKY 442

  Fly   570 SQGEYIVPEKIENIYTLSQYVNQVYVYGESLKSCIIAVVVPDTDVLKQWATENNVRGTLSVLCNN 634
            ....| .|.:|||:  :::..|       .|::|:..:          |...|......|::  .
  Fly   443 QNIMY-YPSEIENV--IAEMPN-------VLEACVFGI----------WDPVNGDEAAASLV--K 485

  Fly   635 KNVKELIMNDMLNWGKQSGLKSFEQVKDIYLHPDPFSVQNGLLTPTFKAKRPQLKSYF 692
            |...:|...|::.:.::.....|:|:....|..|.. |::|    ..|..|..:|.:|
  Fly   486 KPGTQLEAQDVVEYVRKRITAKFKQLNGGALIVDQI-VRSG----NRKTNRSAVKEHF 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 115/578 (20%)
CG18586NP_647993.2 CaiC 35..541 CDD:223395 115/578 (20%)
AFD_class_I 55..530 CDD:302604 112/568 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452245
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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