DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3961 and CG5568

DIOPT Version :9

Sequence 1:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster


Alignment Length:636 Identity:124/636 - (19%)
Similarity:219/636 - (34%) Gaps:168/636 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 FYKESKNGKFVSYI--TENVRTLYQTFREGAYASNNGPCLGWRETLTSPYQWINYDEALLRAKNF 146
            |.:..:|....:.|  |||..                  |.|::..|:..:..:|          
  Fly    44 FQQMERNAMLTAQISVTENTE------------------LTWKDIQTNAMKVASY---------- 80

  Fly   147 GAGMLALGARPKQLIGIYSQNRPEWILYEQGCYSFSLVVVPLYDTLGPDACAFIIRQTDMQVVIV 211
               |..||......:|:..:...........|:........|:......|...:...|..:::..
  Fly    81 ---MRKLGLEQGDFVGVIGRLTTHLTALAYACFFNGTPYHALHTEYEQSAIERLFGITKPRLIFC 142

  Fly   212 EDDGKAAMLLEKAPRSLKIIVAIKPIRQTTLERARSRGIQIFSFIDVEKLGAKGNHP-------- 268
            :.|.     .||.                   :|.::|:|:       ::....|||        
  Fly   143 DGDE-----FEKV-------------------QAATKGLQV-------QIVTMRNHPAGILRIQD 176

  Fly   269 -------------EVPPTAEDLCTVCYTSGTTGNPKGVMLTHGNVVAGVCSVILQMGDHRIRAGD 320
                         .:....:.|..:..:|||:|.||.|.:::.:.:.|                 
  Fly   177 ILTTPVEMNFRPVRLKDGTDQLLAILSSSGTSGLPKAVTISNSHQIIG----------------- 224

  Fly   321 VMVSFLPLAHMFERCCENGMYYVGGCVGFYSGDIKELTNDLKMLKPTVMPAVPRLLNRVYDKIQN 385
               ||||:.....:...|.:.:..|                  :..|:..||..|.:.:.|...:
  Fly   225 ---SFLPVDSSIIQYNPNTLDWASG------------------ITMTINAAVFSLTSIIEDCDFD 268

  Fly   386 DISASGL-KRGLFNMAMRAKEKEIARGVLRRNGCWDKLVFKKVHQAFGGNLRLMVVGSAPLAGNV 449
            ..:..|| ::...:|...:..:     :...:.|      .:.:.|...:::....|.:..:..|
  Fly   269 PANLCGLIEKYRISMVFVSSSQ-----LAMLSNC------PEFYAADLSSVKYFFYGGSNCSLEV 322

  Fly   450 LTFMRCALG--CLVLEGYGQTECTGAITLTVQGDHVPNHVGPPVSCNAVKLVDVPEMEYFANQN- 511
            ...:|..|.  | |...|..||......|....|..||.||.||....:|:|:  |:......| 
  Fly   323 QNKIRSRLSNEC-VNFSYTLTELNSPGCLNFNFDEKPNSVGRPVRGIQIKIVN--ELGEAQGPNV 384

  Fly   512 TGEVCVRGSNVFHGYYKDPEKTAEAIDSEGWHHTGDVGMWLPNGTLRIIDRRKHIFKLSQGEYIV 576
            .||:|......:.||||:||:|.:..|||.|.||||:|....:|.|.||||.|.:.|.....| .
  Fly   385 VGEICFNNGQKWPGYYKNPEETKKMQDSENWFHTGDLGYMDEDGYLFIIDRLKDMLKYQTIMY-Y 448

  Fly   577 PEKIENIYTLSQYVNQVYVYGESLKSCIIAVVVPDTDVLKQWATENNVRGTLSVLCNNKNVKELI 641
            |.:||::  :::..|.|       ::|:..:          |......:...||:  .|...:|.
  Fly   449 PSEIESV--IAEMPNVV-------EACVFGI----------WDPVYGDKAAASVV--KKQGTQLE 492

  Fly   642 MNDMLNWGKQSGLKSFEQVKDIYLHPDPFSVQNGLLTPTFKAKRPQLKSYF 692
            ..|::.:.::.....|:|:....|..|.. :|:|    ..||.|...|:.|
  Fly   493 AQDVVEYVRKRIPAKFKQLNGGALIVDHI-IQSG----NRKANRAATKAEF 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 115/588 (20%)
CG5568NP_647992.1 CaiC 35..540 CDD:223395 124/636 (19%)
Firefly_Luc_like 55..530 CDD:213279 118/615 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452242
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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