DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3961 and CG5568

DIOPT Version :10

Sequence 1:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_647992.1 Gene:CG5568 / 38658 FlyBaseID:FBgn0035641 Length:545 Species:Drosophila melanogaster


Alignment Length:636 Identity:124/636 - (19%)
Similarity:219/636 - (34%) Gaps:168/636 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 FYKESKNGKFVSYI--TENVRTLYQTFREGAYASNNGPCLGWRETLTSPYQWINYDEALLRAKNF 146
            |.:..:|....:.|  |||..                  |.|::..|:..:..:|          
  Fly    44 FQQMERNAMLTAQISVTENTE------------------LTWKDIQTNAMKVASY---------- 80

  Fly   147 GAGMLALGARPKQLIGIYSQNRPEWILYEQGCYSFSLVVVPLYDTLGPDACAFIIRQTDMQVVIV 211
               |..||......:|:..:...........|:........|:......|...:...|..:::..
  Fly    81 ---MRKLGLEQGDFVGVIGRLTTHLTALAYACFFNGTPYHALHTEYEQSAIERLFGITKPRLIFC 142

  Fly   212 EDDGKAAMLLEKAPRSLKIIVAIKPIRQTTLERARSRGIQIFSFIDVEKLGAKGNHP-------- 268
            :.|.     .||.                   :|.::|:|:       ::....|||        
  Fly   143 DGDE-----FEKV-------------------QAATKGLQV-------QIVTMRNHPAGILRIQD 176

  Fly   269 -------------EVPPTAEDLCTVCYTSGTTGNPKGVMLTHGNVVAGVCSVILQMGDHRIRAGD 320
                         .:....:.|..:..:|||:|.||.|.:::.:.:.|                 
  Fly   177 ILTTPVEMNFRPVRLKDGTDQLLAILSSSGTSGLPKAVTISNSHQIIG----------------- 224

  Fly   321 VMVSFLPLAHMFERCCENGMYYVGGCVGFYSGDIKELTNDLKMLKPTVMPAVPRLLNRVYDKIQN 385
               ||||:.....:...|.:.:..|                  :..|:..||..|.:.:.|...:
  Fly   225 ---SFLPVDSSIIQYNPNTLDWASG------------------ITMTINAAVFSLTSIIEDCDFD 268

  Fly   386 DISASGL-KRGLFNMAMRAKEKEIARGVLRRNGCWDKLVFKKVHQAFGGNLRLMVVGSAPLAGNV 449
            ..:..|| ::...:|...:..:     :...:.|      .:.:.|...:::....|.:..:..|
  Fly   269 PANLCGLIEKYRISMVFVSSSQ-----LAMLSNC------PEFYAADLSSVKYFFYGGSNCSLEV 322

  Fly   450 LTFMRCALG--CLVLEGYGQTECTGAITLTVQGDHVPNHVGPPVSCNAVKLVDVPEMEYFANQN- 511
            ...:|..|.  | |...|..||......|....|..||.||.||....:|:|:  |:......| 
  Fly   323 QNKIRSRLSNEC-VNFSYTLTELNSPGCLNFNFDEKPNSVGRPVRGIQIKIVN--ELGEAQGPNV 384

  Fly   512 TGEVCVRGSNVFHGYYKDPEKTAEAIDSEGWHHTGDVGMWLPNGTLRIIDRRKHIFKLSQGEYIV 576
            .||:|......:.||||:||:|.:..|||.|.||||:|....:|.|.||||.|.:.|.....| .
  Fly   385 VGEICFNNGQKWPGYYKNPEETKKMQDSENWFHTGDLGYMDEDGYLFIIDRLKDMLKYQTIMY-Y 448

  Fly   577 PEKIENIYTLSQYVNQVYVYGESLKSCIIAVVVPDTDVLKQWATENNVRGTLSVLCNNKNVKELI 641
            |.:||::  :::..|.|       ::|:..:          |......:...||:  .|...:|.
  Fly   449 PSEIESV--IAEMPNVV-------EACVFGI----------WDPVYGDKAAASVV--KKQGTQLE 492

  Fly   642 MNDMLNWGKQSGLKSFEQVKDIYLHPDPFSVQNGLLTPTFKAKRPQLKSYF 692
            ..|::.:.::.....|:|:....|..|.. :|:|    ..||.|...|:.|
  Fly   493 AQDVVEYVRKRIPAKFKQLNGGALIVDHI-IQSG----NRKANRAATKAEF 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 115/588 (20%)
CG5568NP_647992.1 Firefly_Luc_like 55..528 CDD:341237 117/613 (19%)

Return to query results.
Submit another query.