DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3961 and CG4563

DIOPT Version :9

Sequence 1:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_611913.1 Gene:CG4563 / 37901 FlyBaseID:FBgn0035006 Length:537 Species:Drosophila melanogaster


Alignment Length:575 Identity:115/575 - (20%)
Similarity:185/575 - (32%) Gaps:187/575 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 SPYQWINYDEALLRAKNFGAGMLALGARPKQLIGIYSQNRPEWILYEQGCYSFSLVVVPLYDTLG 193
            :|:..:||..                 .|..:.|:||..:|: |::..|         |.||.: 
  Fly   108 TPFHAVNYSR-----------------EPAIVQGLYSVTKPK-IMFIDG---------PDYDRI- 144

  Fly   194 PDACAFIIRQTDMQVVIVEDDGKAAMLLEKAPRSLKIIVAIKPIRQTTLERARSRGIQIFSFIDV 258
                         :.:..|...|...|..|......|...:||                      
  Fly   145 -------------KEITKEWSPKLITLTGKVEGVTSIEDLVKP---------------------- 174

  Fly   259 EKLGAKGNHPE----VPPT----AEDLCTVCYTSGTTGNPKGVMLTHGNVVA--GVC-------- 305
                    ||.    ||.:    .:.:..|..:|||.|.||.|.|:|.::.:  .:|        
  Fly   175 --------HPAEKIYVPASLATGGDQIAVVLCSSGTAGLPKAVALSHRHIASTNSLCISTDVLYT 231

  Fly   306 -SVILQMGDHRIRAGDVMVSFLPLAHMFERCCENGMYYVGGCVGFYSGDIKELTNDLKMLKPTVM 369
             :.|..|....|...::...|..:........|..:|.|                  ...|.|.:
  Fly   232 SATIDWMTGFSITVMNLTCGFTRIISRRTFSAETALYLV------------------SKYKVTCL 278

  Fly   370 PAVPRLLNRVYDKIQNDISASGLKRGLFNMAMRAKEKEIARGVLRRNGCWDKLVFKKVHQAFGGN 434
            ...|.   :.|:...:.::.|                             ::|...|:....||.
  Fly   279 AMAPW---QAYELFTSPLATS-----------------------------EQLESLKIAFVIGGW 311

  Fly   435 LRLMVVGSAPLAGNVLTFMRCALGCL----VLEGYGQTECTGAITLTVQGDH-VPNHVGPPVSCN 494
            :.             |..:|.|...|    |:..||.|| ||.:|:.:  || :...||......
  Fly   312 IS-------------LALLRRAQELLPKTYVMFSYGTTE-TGVVTINI--DHSLECSVGRLAPGM 360

  Fly   495 AVKLVDVPEMEYFANQNTGEVCVRGSNVFHGYYKDPEKTAEAIDSEGWHHTGDVGMWLPNGTLRI 559
            .:|:......:...|| ||||.:.....:.||..:||.||..: .:||.:.||:|.:..:..|.:
  Fly   361 RIKIQGEDGQQLGVNQ-TGEVLIDIGLKWEGYLSNPEDTATTL-QDGWINLGDLGYFDEDNNLYL 423

  Fly   560 IDRRKHIFKLSQGEYIVPEKIENIYTLSQYVNQVYV-------YGESLKSCII---AVVVPDTDV 614
            :||:|.:.|.....| .|.:||.|......|..|.|       ||::..:.||   ...:.|..|
  Fly   424 VDRKKDLLKYKSKHY-WPNEIEQIIAELPEVEHVCVVGVRDARYGDAAGALIIKKEGAEIADQKV 487

  Fly   615 LKQWATENNV------RGTLSVLCNNKNVKELIMNDMLNWGKQSGLKSFEQVKDI 663
            :...|....|      .|.:.|....||....:|..:..       :.||:.|.|
  Fly   488 IDHVAQRVVVDYKQLNAGVIFVDKFPKNANGKVMRSLAR-------EVFEKTKPI 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 115/574 (20%)
CG4563NP_611913.1 CaiC 21..531 CDD:223395 112/569 (20%)
Firefly_Luc_like 49..521 CDD:213279 110/552 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452240
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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