DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3961 and CG9993

DIOPT Version :9

Sequence 1:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_611518.1 Gene:CG9993 / 37358 FlyBaseID:FBgn0034553 Length:543 Species:Drosophila melanogaster


Alignment Length:592 Identity:125/592 - (21%)
Similarity:212/592 - (35%) Gaps:176/592 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 LIGIYSQNRPEWILYEQGCYSFSLVVV---------PLYDTLGPDACAFIIRQTDMQVVIVEDDG 215
            ::||.::|.         .|...:|:.         ||:.....:..|::...|..:|:..:.|.
  Fly    80 VVGISAKNT---------TYLTEVVIAALLNGTPINPLHPDFDAETTAYMFEITKPKVIFCDLDN 135

  Fly   216 KAAMLLEKAPRSLKIIVAIKPIRQTTLERARSRGIQIFSFIDVEKLGAKGNHPEVPPTAEDLC-- 278
            ...:...|:  |||....|..:..|.   ...|.||     |:...|..|...:.......||  
  Fly   136 YQTLSAVKS--SLKFKTEIILLTGTL---PGVRNIQ-----DLLADGCTGYDEKTLFACPHLCGD 190

  Fly   279 ---TVCYTSGTTGNPKGVMLTHGNVVAGVCSVILQMGDHRIRAGDVMVSFLPLAHMFERCCENGM 340
               .:..:||.||.||||..:|.:::..  :.|.|:    ..:..|:..|.||            
  Fly   191 DTAFIITSSGVTGLPKGVTRSHRSLLNS--AKIPQL----FTSDTVLFCFSPL------------ 237

  Fly   341 YYVGGCV-----GFYSGDIKELTNDLKMLKPTVMPAVPRLLNRVYDKIQNDISASGLKRGLFNMA 400
            |:: .|:     ...:|..:.:||     :|..:.....|:.|        ...|.:.....:||
  Fly   238 YWI-SCIFTLLASLVNGCRRIITN-----RPFSVAYFADLVER--------HQVSFVLTVPHHMA 288

  Fly   401 MRAKEKE--------------IARGVLRRNGCWDKLVFKKVHQAFGGNLRLMVVGSAPLAGNVLT 451
            :.||..|              :..|.....|.|     :::::..|.| |..|:           
  Fly   289 LLAKSPERQELAAKMQCVQSFVCSGSKVPMGIW-----RQLYELLGAN-RFAVL----------- 336

  Fly   452 FMRCALGCLVLEGYGQTECTGAITLTVQGDHVPNHVGPPVSCNA-------VKLVDVPEMEYFAN 509
                         ||.|| ||.|:         .:||.|:....       |::|| |..:....
  Fly   337 -------------YGLTE-TGGIS---------KNVGGPLGSEGRLLRNVQVRVVD-PHGQSLGP 377

  Fly   510 QNTGEVCVRGSNVFHGYYKDPEKTAEAIDSEG-WHHTGDVGMWLPNGTLRIIDRRKHIFKLSQGE 573
            ..||::.||.:..:.|||.:|::|...:..:| |..|||.|.:...|.|....|...:||.:...
  Fly   378 NQTGQILVRLNLRWGGYYHNPQETQVTVTPDGKWLLTGDHGYFDDEGCLHFQSRDTDVFKYNHFP 442

  Fly   574 YIVPEKIENIYTLSQYVNQVYVYG------ESLKSCIIAVVVPDTDVLKQWATENNVRGTLSVLC 632
             |.|::||::......|::|.|:|      .:|.:|   .||.:.|.|....||.:|:|.::   
  Fly   443 -IYPKQIEDVILHLPGVHEVAVFGIPDEVSTNLTAC---AVVRNEDELGAQLTEADVKGVVA--- 500

  Fly   633 NNKNVKELIMNDMLNWGKQSGLKSFEQVKD-IYLHPDPFSVQNGLLTPTFKAKRPQLKSYFKPQL 696
                                     :.:.| .::....|.|.|...|...|.:|.::.|    ||
  Fly   501 -------------------------QHLSDAFHIRGGVFFVDNLPKTQNSKVQRRKIWS----QL 536

  Fly   697 EDMYKHL 703
            .:...||
  Fly   537 SEATTHL 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 123/588 (21%)
CG9993NP_611518.1 CaiC 21..532 CDD:223395 120/575 (21%)
AFD_class_I 45..528 CDD:302604 119/571 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452246
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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