DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3961 and CG8834

DIOPT Version :10

Sequence 1:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster


Alignment Length:492 Identity:117/492 - (23%)
Similarity:188/492 - (38%) Gaps:117/492 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 INYDEALLRAKNFGAGMLALGARPKQLIGIYSQNRPEWILYEQGCYSFSLVVVPLYDTLGPDACA 198
            :.:::.|..:......:...|...|.:|||.::|              |..|:||       ..|
  Fly    56 VTFEQGLTWSIRIAQYLKKRGLNHKDVIGIAAKN--------------STYVMPL-------GVA 99

  Fly   199 FIIRQTDMQVV--IVED-----------------DGKAAMLLEKAPRSLKIIVAIKPIRQTTLER 244
            .::..|....|  :::|                 ||:....:.||      .|...|...|..:.
  Fly   100 CLMNGTPFHSVNPVLDDATLTHVFSITKPTLIFCDGQEYDKVHKA------TVGWHPEILTLTDH 158

  Fly   245 ARSRGIQ-IFSFID---VEKLGAKGNHPEVPPTAED--LCTVCYTSGTTGNPKGVMLTHGNVVAG 303
            .  .|:| |.:.:|   .||:    ..|||.....|  :..:| :|||||.||.|.:::      
  Fly   159 V--EGVQGIETLLDPTTTEKI----YQPEVLKEGGDQTVAILC-SSGTTGLPKAVCISN------ 210

  Fly   304 VCSVILQMGDHRIRAGDVMVSFLPLAHMFERCCENGMYYVGGCVGFYSGDIKELTNDLKMLKPTV 368
              |:::|         |.|:           .....:.|||.|:.:       :|.....:..||
  Fly   211 --SILIQ---------DSML-----------ITSQSVIYVGSCLDW-------ITGLWAFVFSTV 246

  Fly   369 MPAVPRLLNRVYDKIQNDISASGLKRGLFNMAMRAKEKEIARGVLRRNGCWDKLVFKKVHQAFGG 433
            ......:.|:.:..   :.....:|:...|.|: ...:.::..:...:...|.|. ...|..:||
  Fly   247 FGCTRIISNKAFTP---EYFVGLVKKYKINYAV-LPPRHLSALITCPDAKPDALA-PITHLNYGG 306

  Fly   434 NLRLMVVGSAPLAGNVLTFMRCALGC---LVLEGYGQTECTGAITLTVQGDHVPNHVGPPVSCNA 495
                   ||..||    |..|....|   :...|||.|| .||||:.:...:| :..|.||....
  Fly   307 -------GSISLA----TLQRSQELCKTAMFNSGYGMTE-VGAITINIGISNV-SSAGRPVPGIK 358

  Fly   496 VKLVDVPEMEYFANQNTGEVCVRGSNVFHGYYKDPEKTAEAIDSEGWHHTGDVGMWLPNGTLRII 560
            :::||........|| .||:.|.....::|||.:|.:|....|.|||.||||:|.:.....|.|:
  Fly   359 IRIVDEDGKSLGYNQ-VGEIYVHTGQAWNGYYGNPVETRRMQDFEGWFHTGDLGYFDEQNFLYIV 422

  Fly   561 DRRKHIFKLSQGEYIVPEKIENIYTLSQYVNQVYVYG 597
            ||:|.|.|.: |.:..|.:||.:......|..|.|.|
  Fly   423 DRKKEILKYN-GLHYWPTEIETVIAELSQVQDVCVVG 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 117/492 (24%)
CG8834NP_610779.1 Firefly_Luc_like 46..519 CDD:341237 117/492 (24%)

Return to query results.
Submit another query.