DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3961 and hll

DIOPT Version :10

Sequence 1:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster


Alignment Length:680 Identity:179/680 - (26%)
Similarity:287/680 - (42%) Gaps:114/680 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 RTLYQTFREGAYASNNGPCLGWRETLTSPYQW--INYDEALLRAKNFGAGMLALGARPKQLIGIY 164
            :|:.:.|:|.....::.|.|.|....:....|  :.:.|...|.:.....:|::|...:..:||.
  Fly    36 QTIPEFFKESCEKYSDLPALVWETPGSGNDGWTTLTFGEYQERVEQAALMLLSVGVEERSSVGIL 100

  Fly   165 SQNRPEWILYEQGCYSFSLVVVPLYDTLGPDACAFIIRQTDMQVVIVEDDGKAAML---LEKAPR 226
            :.|.|||...|.|......||..:|.:...:|...::...:..|.:|:|..:.|.|   .|:.||
  Fly   101 AFNCPEWFFAEFGALRAGAVVAGVYPSNSAEAVHHVLATGESSVCVVDDAQQMAKLRAIKERLPR 165

  Fly   227 SLKIIVAIKPIRQTTLERA------RSRGIQIFSFIDVEKLGAKGNHPEVPPTAEDLCTVCYTSG 285
             ||.::.:....:..::..      :....|.||....|:|.|:    |....|.:...:.:|||
  Fly   166 -LKAVIQLHGPFEAFVDHEPGYFSWQKLQEQTFSSELKEELLAR----ESRIRANECAMLIFTSG 225

  Fly   286 TTGNPKGVMLTHGNVVAGVCSVILQMGDHRIRAG-DVMVSFLPLAHMFERCCENGMYYVG----G 345
            |.|.||.|||:|.|:|....|....|.|  |:.| :..||:|||:|:..:..:   .::|    |
  Fly   226 TVGMPKAVMLSHDNLVFDTKSAAAHMQD--IQVGKESFVSYLPLSHVAAQIFD---VFLGLSHAG 285

  Fly   346 CVGFYSGDIKE--LTNDLKMLKPTVMPAVPRLLNRVYDKIQNDISASGLKRGLFNMAMRAKEKEI 408
            ||.|...|..:  |....:..:||.|..||    ||::|:|..:.|:..|...::..:.|:    
  Fly   286 CVTFADKDALKGTLIKTFRKARPTKMFGVP----RVFEKLQERLVAAEAKARPYSRLLLAR---- 342

  Fly   409 ARGVLRRN--------------------GCWDKLVFKKVHQAFG-GNLRLMVVGSAPLAGNVLTF 452
            ||..:..:                    .|   .|.|.:.:..| .|.|:...|.||.:..:..|
  Fly   343 ARAAVAEHQTTLMAGKSPSIYGNAKYWLAC---RVVKPIREMIGVDNCRVFFTGGAPTSEELKQF 404

  Fly   453 ---MRCALGCLVLEGYGQTECTGAITLTVQGDHVPNHVGPPVSCNAVKL-VDVPEMEYFANQNTG 513
               :..|||    |.||.:|.:|||||.|.   :.|......:|..|.| :..|:.     ...|
  Fly   405 FLGLDIALG----ECYGMSETSGAITLNVD---ISNLYSAGQACEGVTLKIHEPDC-----NGQG 457

  Fly   514 EVCVRGSNVFHGYYKDPEKTAEAIDSEGWHHTGDVGMWLPNGTLRIIDRRKHIFKLSQGEYIVPE 578
            |:.:||..||.||...|:||.|.:..:||.|:||:|...|.|.|.|..|.|.:...:.||.|.|.
  Fly   458 EILMRGRLVFMGYLGLPDKTEETVKEDGWLHSGDLGYIDPKGNLIISGRLKELIITAGGENIPPV 522

  Fly   579 KIENIYTLS-QYVNQVYVYGE---------SLKS-CIIAVVVPDTDVLK----QWATENNVRGT- 627
            .||.:.... ..|:.|.:.|:         |||: |.....:| .|.|:    :|..:.::..| 
  Fly   523 HIEELIKKELPCVSNVLLIGDHRKYLTVLLSLKTKCDAKTGIP-LDALREETIEWLRDLDIHETR 586

  Fly   628 LSVLCN--------NKNVK-----ELIMNDMLNWGKQSGLK--------SFEQVKDIYLHPDPFS 671
            ||.|.|        |....     |:.....|....:.|:|        :.::|:...|....||
  Fly   587 LSELLNIPADLQLPNDTAALAATLEITAKPKLLEAIEEGIKRANKYAISNAQKVQKFALIAHEFS 651

  Fly   672 VQNGLLTPTFKAKRPQLKSYFKPQLEDMYK 701
            |..|.|.||.|.:|..:.:.:...:|.:||
  Fly   652 VATGELGPTLKIRRNIVHAKYAKVIERLYK 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 171/650 (26%)
hllNP_609696.1 Adenylate forming domain, Class I superfamily 62..680 CDD:473059 171/651 (26%)

Return to query results.
Submit another query.