DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3961 and lcf2

DIOPT Version :10

Sequence 1:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_596185.1 Gene:lcf2 / 2541350 PomBaseID:SPBP4H10.11C Length:689 Species:Schizosaccharomyces pombe


Alignment Length:612 Identity:193/612 - (31%)
Similarity:309/612 - (50%) Gaps:44/612 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 WRETLTSPYQWINYDEALLRAKNFGAGMLALGARPKQLIGIYSQNRPEWILYEQGCYSFSLVVVP 187
            |......||::|::::....|...|:|::|.|...:..:..::....:|....|||.|.::.:|.
pombe    90 WTTYELGPYEYISFNKVYEIALALGSGLVASGITSETTMLFFAATSAKWFTTAQGCSSQAIPIVT 154

  Fly   188 LYDTLGPDACAFIIRQTDMQVVIVEDDGKAAMLLEKAPRS--LKIIVAIKPIRQTTLERARSRG- 249
            .|:|||.|.....:.:...:.:.. |......||....:|  :|:||......:..:|..:|.. 
pombe   155 AYETLGEDGIYTSLDECKSRAIFT-DPNLIPKLLGPLKQSTWVKLIVCSSTPSEDLVELVKSTAP 218

  Fly   250 -IQIFSFIDVEKLGAKGNHPEVPPTAEDLCTVCYTSGTTGNPKGVMLTHGNVVAGVCSVILQMGD 313
             ::|.::.::..||.:...|..||.|:|:|...||||:||.||||:|.|.|::|.:..:...:..
pombe   219 DVEIITYDNLLSLGKEKPQPPHPPKADDICCYMYTSGSTGKPKGVVLLHRNIIAALGGINRILSQ 283

  Fly   314 HRIRAGDVMVSFLPLAH----MFERCCENGMYYVGGCVGFYS------GDIKELTNDLKMLKPTV 368
            | |...|.::::|||||    :||.||    .|.||.:|:.|      ..:.....||...:|||
pombe   284 H-INVKDYVLAYLPLAHIFEFIFEMCC----LYWGGVLGYASPRTLTDASVVNCKGDLTEFRPTV 343

  Fly   369 MPAVPRLLNRVYDKIQNDI-----SASGLKRGLFNMAMRAKEKEIARGVLRRNGCWDKLVFKKVH 428
            :..||    .||:.|:..|     |....::.:|:.::..|:..|.|. |..:...|.:||.||.
pombe   344 LIGVP----AVYELIKKGILAKVSSMPAHRQKVFSGSLSLKQYLIERN-LPGSAALDAIVFNKVK 403

  Fly   429 QAFGGNLRLMVVGSAPLAGNVLTFMRCALGCLVLEGYGQTE-CTGAITLTVQGDHV-PNHVGPPV 491
            .|.||.||..:.|.|.||.:...|:...: |.||.|||.|| |.|:..|:.:..|: .|.||.|:
pombe   404 AATGGRLRYCISGGAALAASTQAFLSSCI-CPVLPGYGLTETCAGSFVLSPEQWHLYANTVGFPI 467

  Fly   492 SCNAVKLVDVPEMEYFANQN--TGEVCVRGSNVFHGYYKDPEKTAEAIDSEGWHHTGDVGMWLPN 554
            .....||||:|::.|:.:.:  .|||.:||..|.:||...||....|...:||..|||||.....
pombe   468 PSIEFKLVDIPDLGYYTDSSPPRGEVWIRGPAVCNGYLNRPEDNKAAFTEDGWFKTGDVGEIAKG 532

  Fly   555 GTLRIIDRRKHIFKLSQGEYIVPEKIENIYTLSQYVNQVYVYGESLKSCIIAVVVPDTDVLKQWA 619
            .|||:|||:|:|.|...||||..||||..:..|..|:.|..|.:...:..:.:|.||.:.|:.:.
pombe   533 NTLRLIDRKKNIVKSLNGEYIALEKIEAQFFTSPLVSNVCAYADVNHAKPVVIVNPDENGLRTYL 597

  Fly   620 TEN-------NVRGTLSVLCNNKNVKELIMNDMLNWGKQSGLKSFEQVKDIYLHPDPFSVQNGLL 677
            |:|       |...||:.||.:..|:.||:.:::|.|||..|.|.|..:.:.|....::.:|..|
pombe   598 TKNSGSSFNGNPNDTLTNLCKDSGVQHLILKELINIGKQQRLASIEIPEGVVLSDFEWTAENNFL 662

  Fly   678 TPTFKAKRPQLKSYFKPQLEDMY--KH 702
            |.:.|.||..:.:::..:::..|  ||
pombe   663 TASRKVKRQVIVAHYSDEIQKAYSKKH 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 190/602 (32%)
lcf2NP_596185.1 LC_FACS_euk1 96..673 CDD:341294 189/588 (32%)
Adenylate forming domain, Class I superfamily <149..>267 CDD:473059 35/118 (30%)

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