DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3961 and acs-3

DIOPT Version :9

Sequence 1:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster
Sequence 2:NP_503540.1 Gene:acs-3 / 178677 WormBaseID:WBGene00020343 Length:653 Species:Caenorhabditis elegans


Alignment Length:662 Identity:232/662 - (35%)
Similarity:378/662 - (57%) Gaps:27/662 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VPERPLVPLENQSPLLEGPEQIHVSKFYKES-KNGKFVSYITENV-RTLYQTFREGAYASNNGPC 120
            |.::.|...|..|.|::|||:|      :|| :..|.::...:.: :|::......|..:.|.|.
 Worm     2 VQKKMLTHPELFSRLVDGPERI------RESVQVPKPITGCPDGITKTVWDVLTRSAQLNPNAPL 60

  Fly   121 LGWRETLTSPYQWINYDEALLRAKNFGAGMLAL---GARPKQLIGIYSQNRPEWILYEQGCYSFS 182
            .|  |::...:.:..|.||:..|...|:|::|:   .....:||||...:..:::....|...|.
 Worm    61 FG--ESVNGRHVYTTYREAVEEATIIGSGIVAIMQKNQSTNKLIGIAGIHSRKYMHTMHGISGFD 123

  Fly   183 LVVVPLYDTLGPDACAFIIRQTDMQVVIVED----DGKAAMLLEKAPRSLKIIVAIKPIRQTTLE 243
            |..||||.....:....||....::::..|:    :|..:..|....||||.::.:.  :.|||:
 Worm   124 LTTVPLYHQSKLETLCDIIDNCKLEIIFCENAKRAEGFLSSKLGDRLRSLKTLIILD--KTTTLQ 186

  Fly   244 RARSRGIQIFSFIDVEKLGAKGNHPEVPPTAEDLCTVCYTSGTTGNPKGVMLTHGNVVAGVCSVI 308
              :...:::.|..:.:::|.:.....|.|..|....:|:||||||.||||.::||::|..|..:.
 Worm   187 --KHDDVEVMSLDEFKEIGKRNKRNPVKPKPETTYVICHTSGTTGRPKGVEMSHGSLVTSVSGIF 249

  Fly   309 LQMG-DHRIRAG--DVMVSFLPLAHMFERCCENGMYYVGGCVGFYSGDIKELTNDLKMLKPTVMP 370
            .... .::.:.|  |...|||.|||::|...:....|.||.:|.|.|:...|...::.|:||::.
 Worm   250 TSWTIAYKWKFGLEDTYFSFLSLAHIYEHLIQTLTIYFGGKIGIYDGNTATLIPQIQKLEPTIVS 314

  Fly   371 AVPRLLNRVYDKIQNDISASG-LKRGLFNMAMRAKEKEIARGVLRRNGCWDKLVFKKVHQAFGGN 434
            .||||||::|:.:.:.::..| :.|.||:.|.:.|.:::.|||||.:..:||:||||:....||.
 Worm   315 LVPRLLNKLYEAVHDGVAKKGFIARKLFDYAKKTKARQLQRGVLRYDTFFDKIVFKKLKLMLGGK 379

  Fly   435 LRLMVVGSAPLAGNVLTFMRCALGCLVLEGYGQTECTGAITLTVQGDHVPNHVGPPVSCNAVKLV 499
            |:::..|.||:...|.||.|.|.||.::||||||||:.|.|||:..|....:||.|.....||||
 Worm   380 LKVLTSGGAPITKEVKTFTRYAYGCPLVEGYGQTECSAAGTLTLPWDTTYGNVGGPAPWAQVKLV 444

  Fly   500 DVPEMEYFANQNTGEVCVRGSNVFHGYYKDPEKTAEAIDSEGWHHTGDVGMWLPNGTLRIIDRRK 564
            ||||..||:..:.||||.||:.:..||::|||.||:.||||||.||||:|.|||.|.|:||||:.
 Worm   445 DVPEKNYFSMNDEGEVCFRGNAMMTGYFQDPELTAKTIDSEGWLHTGDIGKWLPTGGLQIIDRKN 509

  Fly   565 HIFKLSQGEYIVPEKIENIYTLSQYVNQVYVYGESLKSCIIAVVVPDTDVLKQWATENNVRG--T 627
            .:||||||:::.|.:||.||..|..:.|:||.|::.:|.::.:||.|....||......:.|  :
 Worm   510 EMFKLSQGDFVSPIQIEAIYANSPLITQIYVTGKTERSFLVGIVVLDLPRFKQLPLVKALDGKES 574

  Fly   628 LSVLCNNKNVKELIMNDMLNWGKQSGLKSFEQVKDIYLHPDPFSVQNGLLTPTFKAKRPQLKSYF 692
            :.::..||.||..::.::..:.||:||::.|.:::::|....|:.:|||:|.|.|.:|..|:.||
 Worm   575 IEMIMENKEVKNAVIAELNKYAKQNGLQTIELIRNVHLTLQEFTEENGLITSTLKNRRKILEDYF 639

  Fly   693 KPQLEDMYKHLD 704
            .||:..|||.::
 Worm   640 APQIAKMYKEVE 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 212/583 (36%)
acs-3NP_503540.1 LC-FACS_euk 67..648 CDD:341250 212/584 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1301
OMA 1 1.010 - - QHG53493
OrthoDB 1 1.010 - - D331165at33208
OrthoFinder 1 1.000 - - FOG0000532
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X329
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.740

Return to query results.
Submit another query.