DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad9 and RAD9A

DIOPT Version :9

Sequence 1:NP_001097639.2 Gene:Rad9 / 40054 FlyBaseID:FBgn0025807 Length:456 Species:Drosophila melanogaster
Sequence 2:XP_006718715.1 Gene:RAD9A / 5883 HGNCID:9827 Length:402 Species:Homo sapiens


Alignment Length:440 Identity:119/440 - (27%)
Similarity:184/440 - (41%) Gaps:105/440 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LQMRAINATQSAVGSISFKRSMFEVYD-MPPHSDFY-CKISMKGCLAVFRNM----NEVEYCELN 94
            |.:|.:|:::||.....|....|:.|. ..|..|.. |||.||..|:|||::    ..||.|.::
Human    47 LSLRTVNSSRSAYACFLFAPLFFQQYQAATPGQDLLRCKILMKSFLSVFRSLAMLEKTVEKCCIS 111

  Fly    95 LLDNQTNLQVNLRCKLETTKEATISIIDDQNINTNINTDQMPNIIRGDHKLLTDISNNFNSSEEE 159
            |....:.|.|.|.||....|...:|..|.:::....:....|:::|...::|.:....|:.:..|
Human   112 LNGRSSRLVVQLHCKFGVRKTHNLSFQDCESLQAVFDPASCPHMLRAPARVLGEAVLPFSPALAE 176

  Fly   160 LTLEANSG-SVVAKNY-IEGARVNDKFMRTQLKLKPSEFEQYQVTKETVITFCIKEFRAFLLFAE 222
            :||....| .|:.::| .|.|....|.|.|::.|...:|:|.|..:...||||:||||..|.|||
Human   177 VTLGIGRGRRVILRSYHEEEADSTAKAMVTEMCLGEEDFQQLQAQEGVAITFCLKEFRGLLSFAE 241

  Fly   223 CLNASLTLEFDEAGMPFLLKIKKHGEIECLL----IMSTLSPDDISFSEDYCQKDLTVQDEDVRA 283
            ..|.:|::.||..|.|.:..||     :.||    :::|||..| |.|:|.              
Human   242 SANLNLSIHFDAPGRPAIFTIK-----DSLLDGHFVLATLSDTD-SHSQDL-------------- 286

  Fly   284 AAAKRKSSVSKPNVTNKRKGSSSEPAAVQPKRRVEETQLESSLDNPLFQFRDSEAPSVQHPRILA 348
                               ||        |:|.....||              :|.|..||...|
Human   287 -------------------GS--------PERHQPVPQL--------------QAHSTPHPDDFA 310

  Fly   349 --EVDT-VVLIEDEAEQEALMLAAADAALEASMAPAPEPPNSTEVCFINTDDSQQPKPAKSSSDE 410
              ::|: ::.:|.....|...:..:     .|::|.|:||.|               |...|.:|
Human   311 NDDIDSYMIAMETTIGNEGSRVLPS-----ISLSPGPQPPKS---------------PGPHSEEE 355

  Fly   411 DE----TIPQSPERPNKVRTIFSRCFQRTYVP-REPSPNTQVYAPNSDTE 455
            ||    |:|.:|. |.|.|::|   |.....| |.|...:.|.|.:|:.|
Human   356 DEAEPSTVPGTPP-PKKFRSLF---FGSILAPVRSPQGPSPVLAEDSEGE 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad9NP_001097639.2 PCNA 7..262 CDD:238322 75/237 (32%)
Rad9 13..258 CDD:282052 72/233 (31%)
RAD9AXP_006718715.1 Rad9 46..276 CDD:282052 72/233 (31%)
PCNA 47..278 CDD:238322 74/235 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146373
Domainoid 1 1.000 122 1.000 Domainoid score I5643
eggNOG 1 0.900 - - E1_KOG2810
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32118
Inparanoid 1 1.050 136 1.000 Inparanoid score I4559
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1176140at2759
OrthoFinder 1 1.000 - - FOG0002689
OrthoInspector 1 1.000 - - otm41915
orthoMCL 1 0.900 - - OOG6_103735
Panther 1 1.100 - - O PTHR15237
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1066
SonicParanoid 1 1.000 - - X3445
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.790

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