DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad9 and rad9b

DIOPT Version :10

Sequence 1:NP_649066.1 Gene:Rad9 / 40054 FlyBaseID:FBgn0025807 Length:456 Species:Drosophila melanogaster
Sequence 2:XP_012811318.1 Gene:rad9b / 100490318 XenbaseID:XB-GENE-990519 Length:411 Species:Xenopus tropicalis


Alignment Length:442 Identity:104/442 - (23%)
Similarity:180/442 - (40%) Gaps:93/442 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKYTLEGSNARVIAKAVQSLSKVGKEMFIEIDQQSLQMRAINATQSAVGSISFKRSMFEVYDMPP 65
            ||..:.|.:.:|..|||.|||::|..::.:..::.|.:|.:|::.||...|.|....|..|....
 Frog    26 MKCIIPGRHTKVFGKAVHSLSRIGNALWFDPLEKGLALRVVNSSMSAYACIVFSPHFFHSYHRSA 90

  Fly    66 -HS--------DFYCKISMKGCLAVFRNMN----EVEYCEL--NLLDNQTNLQVNLRCKLETTKE 115
             |.        :|.||.|:|..|.|||:::    .|:.|.:  |:.:...|.|:..|..:  ||.
 Frog    91 LHEQGAAYAEINFKCKYSVKSVLPVFRSLSTLEKNVDKCTIYTNVNEGYMNFQLFYRNGI--TKT 153

  Fly   116 ATISIIDDQNINTNINTDQMPNIIRGDHKLLTDISNNFNSSEEELTLEANSGSVVAKNYIEGARV 180
            ..::..:.:.:......:..||::|...::|:|:..:|.|.:||:||......|..|.|.|....
 Frog   154 HQLAYEECEPLQAVFAKNTCPNVLRIQPRVLSDVVVHFPSCQEEITLSVTPLRVSFKTYCEEELE 218

  Fly   181 NDKFMRTQLKLKPSEFEQYQVTKETVITFCIKEFRAFLLFAECLNASLTLEFDEAGMPFLLKIKK 245
            ..|.:.|::.|.|.||..:||.::..:|||:||.|.||.|||..::.:::...:||.|....: :
 Frog   219 FSKSVHTEMHLGPEEFHYFQVGEDAEVTFCLKELRGFLGFAETTSSYISVHLSKAGKPVAFSM-E 282

  Fly   246 HGEIECLLIMSTLSPDDISFSEDYCQKDLTVQDEDVRAAAAKRKSSVSKPNVTNKRKGSSSEPA- 309
            :...|..:|::||:..::.                        |||...|.:....|..:..|. 
 Frog   283 NMFFEADIILATLAESEMG------------------------KSSQKSPGIIAGSKLCTPNPGT 323

  Fly   310 ----AVQPKRRVEETQLESSLDNPLFQFRDSEAPSVQHPRILAEVDTVVLIEDEAEQEALMLAAA 370
                |:.....::..|:.|:        :...|...|              :|..|:        
 Frog   324 GVSNAISLSENIDSQQIIST--------KHGNAEDAQ--------------QDTVEE-------- 358

  Fly   371 DAALEASMAPAPEPPNSTEVCFINTDDSQQPKP--------AKSSSDEDETI 414
                    .|...|.|.....|.....||..:.        |.:|.||||.:
 Frog   359 --------TPNHSPYNKFCTLFFGAVSSQTQENADRMFCSLATASEDEDEDL 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad9NP_649066.1 Rad9 14..258 CDD:427739 73/258 (28%)
rad9bXP_012811318.1 Rad9 38..295 CDD:427739 73/259 (28%)

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