DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grx1 and PRM4

DIOPT Version :9

Sequence 1:NP_001246827.1 Gene:Grx1 / 40053 FlyBaseID:FBgn0036820 Length:114 Species:Drosophila melanogaster
Sequence 2:NP_015169.1 Gene:PRM4 / 855947 SGDID:S000006077 Length:284 Species:Saccharomyces cerevisiae


Alignment Length:112 Identity:24/112 - (21%)
Similarity:42/112 - (37%) Gaps:18/112 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VGSALRSPIVDMSTK-QAKFVENTIASNKVVIFSKTYCPYCTMAKEPFKKLNVDATIIELDGNPD 67
            :.|.:...|.:.|:| .:||...:..::.||..:.|            ..||..::.:.|..|.|
Yeast    98 IQSEVEVDIPEPSSKATSKFSSRSFQTDNVVTATTT------------TTLNPRSSSLALQKNCD 150

  Fly    68 GNEIQAVLGEITGARTVPRVFIDGKFIGGGTDIKRMFETGALQKYFQ 114
            ..:.......:...||.|.|.    || ..:....:|....||:.|:
Yeast   151 HKKFDPRTDFLDIIRTSPAVL----FI-KSSQADSIFLKNLLQREFE 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grx1NP_001246827.1 GRX_GRXh_1_2_like 31..111 CDD:239511 16/79 (20%)
PRM4NP_015169.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0695
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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